Table 2 Main characteristics of the six closed replicons.
From: Genomics of high molecular weight plasmids isolated from an on-farm biopurification system
Replicon Name | Replicon type | rep gene | rep gene ID (see Table S5) | rep Pfam | Lenght | Number of CDSs | % GC content |
|---|---|---|---|---|---|---|---|
pMC1 | phage * | yes | CDS_18 | No detected | 39.636 bp | 51 | 51,94 |
pMC2 | phage * | no | – | – | 37.598 bp | 50 | 60,9 |
pMC3 | plasmid | yes | CDS_8 | No detected | 7.915 bp | 16 | 31,78 |
pMC4 | plasmid | yes | CDS_8 | pfam02486 | 7.144 bp | 12 | 57,5 |
pMC5 | plasmid | yes | CDS_6 | pfam02486 | 4.059 bp | 6 | 30,92 |
pMC6 | plasmid | yes | CDS_17 | pfam01051 | 38.140 bp | 44 | 45,69 |
