Figure 6: Results for Genetic Analysis Workshop 18 (GAW18) data. | Scientific Reports

Figure 6: Results for Genetic Analysis Workshop 18 (GAW18) data.

From: Conditioning adaptive combination of P-values method to analyze case-parent trios with or without population controls

Figure 6

The figure shows the results of the seven tests when analyzing the variants with MAF ≤ 0.05 in the GAW18 data. The x-axis is the chromosome number, and the y-axis is –log10(P-value). The P-value of conADA(PC) was obtained with the sequential Monte Carlo permutation, and the minimum and maximum numbers of permutations were set as 102 and 106, respectively. Because there were totally 38,091 genes/regions, the significance level was set at , marked at with blue lines.

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