Table 4 Time Lapse Key Pathways.

From: Systems view of adipogenesis via novel omics-driven and tissue-specific activity scoring of network functional modules

Time lapse

Selected Processes

Result

Ref (e.g.)

6 v 0

Decrease in cytokine signaling

Certain cytokines block adipogenesis

19,20,67

Differential transcription factor regulation

Cell cycle arrest, promotion of adipogenesis

76, 77, 78, 79

48 v 6

IL signalling pathways

Signalling through JAK/STAT

67,100

Peroxisome & UnsatFA synthesis

Fatty acid metabolism

101

Prolactin receptor signalling

Regulation of glucose/lipid & transporters

95

Pathogenic E. coli

Changes in cytoskeletal structures

81, 82, 83

PPAR-γ pathway

Nuclear receptor signalling

74,80,91

NOTCH2,3,4

Signalling

102,103

TGF-β

Signalling

104

Integrin

Extracellular matricx

85,105

96 v 48

PPAR-γ pathway

PPAR signalling

74,91

Focal adhesion/integrin

Cell remodelling

92

Insulin signalling

Insulin responsiveness

84

Leptin & adipokine

Adipokine signaling

67,98

Unsaturated fatty acid synthesis

Fatty acid metabolism

101

Glyoxlate, dicarboxylate, glycine, serine, threonine

Precursors including for fatty acid biosynthesis

 

NOTCH, TGFB, TRIAL, CTCF

Cell signalling

102,103

Citrate and TCA cycle

Changes in energy metabolism

97

Syndecan

Link ECM to signalling pathways

106

P53 pathway

Cell cycle control

107

192 v 96

WNT signalling

Coupling signalling to transcription

93,94

Insulin signalling

Insulin responsiveness

84

Glucose metabolism

Changes in energy metabolism

94

PPAR signalling

PPAR signalling

74,91

FOXM1

Multipl with DNA repair

108

Peroxisome, FA metabolism

Fatty acid metabolism

101

IL5, ERK, ILK, P53

Cell signaling

 

Porphyrin metabolism

Linked to WNT signaling

96

Regulation of pyruvate dehydrogenase, Citrate & TCA cycle

Changes in energy metabolism

97

Syndecan

Link ECM to signalling pathways

106

Branched chain amino acid

Lipid biosynthesis

109

384 v 192

Na independent glucose transporters

Increased glucose & fructose uptake

 

FRA Pathway

Transcriptional regulations

98,110

Integrin 4

Basement membrane structure

105

NGF and Toll

Cell signaling

111

IGF1 Pathway

Adipose regeneration

112

Insulin signalling

Insulin responsiveness

84

Cardiaegf

Calcium regulation

113