Table 1 Plasmids used in this study.

From: The RNA Chaperone Hfq Is Essential for Virulence and Modulates the Expression of Four Adhesins in Yersinia enterocolitica

Plasmid name

Promoter/gene fusion

Description

Source or Reference

pACYC184

 

origin p15A (15 copies per cell), CmR, TetracyclineR

New England Biolabs

pACYC184ts

 

origin p15A (15 copies per cell), CmR, with a deletion in the tetracycline resistance gene

37

phfq

 

pACYC184-derivative carrying Y. enterocolitica hfq

37

pYopH-L-Bla

 

pACYC184 derivative carrying the promoter and coding sequence of the yopH gene (without stop codon) fused in frame through linker (L) peptide (GGGGS)3 to TEM-1 β-lactamase gene bla, CmR

This study

pFX-P

 

origin RSF1010 (10-12 copies per cell), SpR, gfp gene without start codon, used to generate translational fusions

43

pFX-0

Promoter-less /gfp

pFX-P carrying a promoter-less complete gfp gene, used as a negative control, SpR

43

pFX-1

Plac/gfp

pFX-P carrying a complete gfp gene under control of the Plac promoter

43

pFX-2

PLtetO-1/gfp

pFX-P carrying a complete gfp gene under control of the PLtetO-1 promoter

This study

pFX-ail

Pail /ail‘-’gfp

pFX-P carrying 380 bp upstream of ail start codon, and 9 codons of ail fused in frame with gfp

This study

pFX-PtetO-ail

PLtetO-1/ail‘-’gfp

pFX-P carrying the PLtetO-1 promoter, 59 bp upstream of ail start codon, and 9 codons of ail fused in frame with gfp

This study

pFX-ompX

PompX/ompX‘-’gfp

pFX-P carrying 402 bp upstream of ompX start codon, and 5 codons of ompX fused in frame with gfp

This study

pFX-Plac-ompX

Plac/ompX‘-’gfp

pFX-P carrying the Plac promoter, 44 bp upstream of ompX start codon, and 5 codons of ompX fused in frame with gfp

This study

pFX-invA

PinvA/invA‘-’gfp

pFX-P carrying 494 bp upstream of invA start codon, and 4 codons of invA fused in frame with gfp

This study

pFX-Plac-invA

Plac /invA‘-’gfp

pFX-P carrying the Plac promoter, 121 bp upstream of invA start codon, and 4 codons of invA fused in frame with gfp

This study

pFX-yadA

PyadA/yadA‘-’gfp

pFX-P carrying 686 bp upstream of yadA start codon, and 16 codons of yadA fused in frame with gfp

22

pFX-Plac-yadA

Plac/yadA‘-’gfp

pFX-P carrying the Plac promoter, 264 bp upstream of yadA start codon, and 16 codons of yadA fused in frame with gfp

This study

pFX-rovA

ProvA/rovA‘-’gfp

pFX-P carrying 634 bp upstream of rovA start codon, and 6 codons of rovA fused in frame with gfp

This study

pFX-ompR

PompR/ompR‘-’gfp

pFX-P carrying 188 nucleotides upstream of ompR start codon, and 4 codons of ompR fused in frame with gfp

This study

pFX-phoP

PphoP/phoP‘-’gfp

pFX-P carrying 860 bp upstream of phoP start codon, and 5 codons of phoP fused in frame with gfp

This study

pFX-myfA

PmyfA/myfA‘-’gfp

pFX-P carrying 173 bp upstream of myfA start codon, and 7 codons of myfA fused in frame with gfp

This study

pFX-plac-myfA

Plac/myfA‘-’gfp

pFX-P carrying the Plac promoter, 99 bp upstream of myfA start codon, and 7 codons of myfA fused in frame with gfp

This study