Table 1 Plasmids used in this study.
Plasmid name | Promoter/gene fusion | Description | Source or Reference |
---|---|---|---|
pACYC184 | origin p15A (15 copies per cell), CmR, TetracyclineR | New England Biolabs | |
pACYC184ts | origin p15A (15 copies per cell), CmR, with a deletion in the tetracycline resistance gene | ||
phfq | pACYC184-derivative carrying Y. enterocolitica hfq | ||
pYopH-L-Bla | pACYC184 derivative carrying the promoter and coding sequence of the yopH gene (without stop codon) fused in frame through linker (L) peptide (GGGGS)3 to TEM-1 β-lactamase gene bla, CmR | This study | |
pFX-P | origin RSF1010 (10-12 copies per cell), SpR, gfp gene without start codon, used to generate translational fusions | ||
pFX-0 | Promoter-less /gfp | pFX-P carrying a promoter-less complete gfp gene, used as a negative control, SpR | |
pFX-1 | Plac/gfp | pFX-P carrying a complete gfp gene under control of the Plac promoter | |
pFX-2 | PLtetO-1/gfp | pFX-P carrying a complete gfp gene under control of the PLtetO-1 promoter | This study |
pFX-ail | Pail /ail‘-’gfp | pFX-P carrying 380 bp upstream of ail start codon, and 9 codons of ail fused in frame with gfp | This study |
pFX-PtetO-ail | PLtetO-1/ail‘-’gfp | pFX-P carrying the PLtetO-1 promoter, 59 bp upstream of ail start codon, and 9 codons of ail fused in frame with gfp | This study |
pFX-ompX | PompX/ompX‘-’gfp | pFX-P carrying 402 bp upstream of ompX start codon, and 5 codons of ompX fused in frame with gfp | This study |
pFX-Plac-ompX | Plac/ompX‘-’gfp | pFX-P carrying the Plac promoter, 44 bp upstream of ompX start codon, and 5 codons of ompX fused in frame with gfp | This study |
pFX-invA | PinvA/invA‘-’gfp | pFX-P carrying 494 bp upstream of invA start codon, and 4 codons of invA fused in frame with gfp | This study |
pFX-Plac-invA | Plac /invA‘-’gfp | pFX-P carrying the Plac promoter, 121 bp upstream of invA start codon, and 4 codons of invA fused in frame with gfp | This study |
pFX-yadA | PyadA/yadA‘-’gfp | pFX-P carrying 686 bp upstream of yadA start codon, and 16 codons of yadA fused in frame with gfp | |
pFX-Plac-yadA | Plac/yadA‘-’gfp | pFX-P carrying the Plac promoter, 264 bp upstream of yadA start codon, and 16 codons of yadA fused in frame with gfp | This study |
pFX-rovA | ProvA/rovA‘-’gfp | pFX-P carrying 634 bp upstream of rovA start codon, and 6 codons of rovA fused in frame with gfp | This study |
pFX-ompR | PompR/ompR‘-’gfp | pFX-P carrying 188 nucleotides upstream of ompR start codon, and 4 codons of ompR fused in frame with gfp | This study |
pFX-phoP | PphoP/phoP‘-’gfp | pFX-P carrying 860 bp upstream of phoP start codon, and 5 codons of phoP fused in frame with gfp | This study |
pFX-myfA | PmyfA/myfA‘-’gfp | pFX-P carrying 173 bp upstream of myfA start codon, and 7 codons of myfA fused in frame with gfp | This study |
pFX-plac-myfA | Plac/myfA‘-’gfp | pFX-P carrying the Plac promoter, 99 bp upstream of myfA start codon, and 7 codons of myfA fused in frame with gfp | This study |