Table 3 IAV subtypes detectable by the pan-IAV RT-FRET-PCR.

From: Detection of influenza A virus from live-bird market poultry swab samples in China by a pan-IAV, one-step reverse-transcription FRET-PCR

 

N1

N2

N3

N4

N5

N6

N7

N8

N9

H1

x*

x

x

x

x

x

x

x

x

H2

x

x

x

x

x

x

x

x

x

H3

x

x

x

x

x

x

x

x

x

H4

x

x

x

x

x

x

x

x

x

H5

x

x

x

x

x

x

x

x

x

H6

x

x

x

x

x

x

x

x

x

H7

x

x

x

x

x

x

x

x

x

H8

x

x

x

x

—**

x

—

x

—

H9

x

x

x

x

x

x

x

x

x

H10

x

x

x

x

x

x

x

x

x

H11

x

x

x

x

x

x

x

x

x

H12

x

x

x

x

x

x

x

x

x

H13

—

x

x

—

—

x

—

x

x

H14

—

x

x

—

x

x

—

x

—

H15

—

—

—

x

x

x

x

x

x

H16

—

—

x

—

—

—

—

—

—

  1. *Each of the four primers/probes was individually BLAST-searched against the IAV subtype in GenBank (Table S1) and subtypes with sequences that matched all PCR oligonucleotides were assumed detectable.
  2. **“—” denotes that the universal IAV PCR either cannot amplify or detect the designated IAV subtype, or this IAV subtype does not exist.
Back to article page