Table 3 Non-synonymous mutations detected within the protein coding regions compared to A/Northern-pintail/Washington/40964/2014 (H5N2).

From: Epidemiological and Evolutionary Inference of the Transmission Network of the 2014 Highly Pathogenic Avian Influenza H5N2 Outbreak in British Columbia, Canada

Strain

Protein

PB2

PB1

PA

HAb

NP

NA

M2

NS1

NS2

A/chicken/BC/FAV8/2014 (H5N2)

L386V

  

L8F, N130T, N416S

 

R338W, R435M, E368K

   

A/chicken/BC/FAV9/2014 (H5N2)

M47I, L386V, K721E

  

L8F, N130T, N416S

S3P

L35S, R338W, R435M, E368K

   

A/turkey/BC/FAV10/2014 (H5N2)

L386V

L373I

 

L8F, N130T

 

E368K

   

A/turkey/BC/FAV14/2014 (H5N2)

L386V, S534P

 

G152R

L8F, N130T

I109Ta

E368K

 

D237G

I80V

A/chicken/BC/FAV15/2014 (H5N2)

L386V

M414V

V669I

L8F, N130T, N416S

T15I

R338W, R435M, E368K

  

R86K

A/chicken/BC/FAV17/2014 (H5N2)

L386V

  

L8F, N130T, N416S

 

R338W, R435M, E368K

  

R86K

A/turkey/BC/FAV19/2014 (H5N2)

L386V, L435P, S534P

  

L8F, N130T

I109Ta

E368K

   

A/chicken/BC/FAV20/2014 (H5N2)

L386V

L298P

 

L8F, N130T

 

E368K, I469V

   

A/chicken/BC/FAV21/2014 (H5N2)

L386V

M111T

 

L8F, N130T, F257L

 

H274R, E368K

 

R224K

E67K

A/chicken/BC/FAV22/2014 (H5N2)

L386V

 

V700I

L8F, N130T

 

E368K

   

A/chicken/BC/FAV23/2014 (H5N2)

L386V, S534P

  

L8F, N130T, D171N

I109Ta

E368K

 

V136M

 

A/chicken/BC/FAV24/2014 (H5N2)

L386V, S534P

 

G58D, F672L

L8F, N130T

M105Va, I257T

P46L, E368K

   

A/chicken/BC/FAV25/2014 (H5N2)

M66I, L386V

  

L8F, N130T, I178V

Q327L

I305V, D309G, S332Y, E368K

   

A/turkey/ON/FAV7/2015 (H5N2)

L386V, T530A, I559T, V649I

R215Ka

 

I4T, L8F, N130T, V226M

 

R253K, V412A, N463D, E368K

Q78R

I176T

 

A/chicken/ON/FAV8/2015 (H5N2)

T97A, L386V, V649I

 

N321K

I4T, L8F, N130T, V226M

 

R253K, V412A, N463D, E368K

Q78R

I176T

 

A/turkey/ON/FAV10/2015 (H5N2)

L386V, V649I

T25I

N321K

I4T, L8F, N130T, V226M

 

E83G, R253K, V412A, N463D, E368K

Q78R

T127P, I176T

 
  1. aPositively selected amino acid changes.
  2. bAmino acid numbering based on the hemagglutinin precursor.