Table 2 Topology parameters of wild type and mutant networks.
From: Dynamics Correlation Network for Allosteric Switching of PreQ1 Riboswitch
System | Clustering coefficient | Network density | Network centralization | Network heterogeneity | Avg. number of neighbors |
|---|---|---|---|---|---|
Apo riboswitch | 0.405 | 0.060 | 0.045 | 0.325 | 3.458 |
Bound riboswitch | 0.479 | 0.069 | 0.068 | 0.358 | 4.10 |
M1 | 0.477 | 0.064 | 0.076 | 0.334 | 3.729 |
M2 | 0.478 | 0.072 | 0.066 | 0.312 | 4.233 |
M3 | 0.422 | 0.067 | 0.053 | 0.325 | 3.967 |
M4 | 0.468 | 0.063 | 0.022 | 0.244 | 3.733 |
M5 | 0.437 | 0.059 | 0.044 | 0.347 | 3.467 |
M6 | 0.441 | 0.066 | 0.039 | 0.312 | 3.831 |
MS1 | 0.449 | 0.065 | 0.044 | 0.382 | 3.649 |
MS2 | 0.449 | 0.069 | 0.086 | 0.369 | 4.10 |