Table 1 Assembly and annotation results of transcriptome sequencing.
Category | Number | Database | Number of unigenes |
|---|---|---|---|
Total Raw Reads | 92,991,884 | NR | 33,354 |
Total Clean Reads | 87,582,724 | NT | 45,648 |
Q20 percentage | 98.11% | Swiss-Prot | 29,753 |
GC percentage | 48.70% | KEGG | 24,094 |
Total number of contigs | 127,712 | COG | 9,072 |
Total length (bp) of contigs | 38,443,923 | GO | 22,222 |
Mean Length (bp) of contigs | 301 | Total Number of annotated unigenes | 46,569 |
N50 of contigs | 437 | ||
Total number of unigenes | 52,918 | ||
Total length (bp) of unigenes | 33,582,035 | None annotated unigenes | 6,349 |
Mean length (bp) of unigenes | 635 | ||
N50 of unigenes | 865 |
