Table 2 Alignment results of 8 libraries mapping to the reference transcriptome.
Sample ID | Total reads | Total base pairs | Total mapped reads | Unique match | Multi-position match | Total unmapped reads |
|---|---|---|---|---|---|---|
StageI-1 | 14,010,101 (100.00%) | 1,893,716,998 (100.00%) | 13,518,462 (96.49%) | 8,802,813 (62.83%) | 4,715,649 (33.66%) | 491,639 (3.51%) |
StageI-2 | 15,412,123 (100.00%) | 2,149,413,540 (100.00%) | 14,947,070 (96.98%) | 9,564,804 (62.06%) | 5,382,266 (34.92%) | 465,053 (3.02%) |
StageII-1 | 12,371,018 (100.00%) | 1,739,928,464 (100.00%) | 12,028,229 (97.23%) | 7,172,029 (57.97%) | 4,856,200 (39.25%) | 342,789 (2.77%) |
StageII-2 | 15,891,229 (100.00%) | 2,332,924,677 (100.00%) | 15,533,624 (97.75%) | 9,456,435 (59.51%) | 6,077,189 (38.24%) | 357,605 (2.25%) |
StageIII-1 | 15,194,682 (100.00%) | 2,104,759,656 (100.00%) | 14,838,649 (97.66%) | 8,411,453 (55.36%) | 6,427,196 (42.30%) | 356,033 (2.34%) |
StageIII-2 | 12,908,078 (100.00%) | 1,758,036,319 (100.00%) | 12,612,680 (97.71%) | 6,935,639 (53.73%) | 5,677,041 (43.98%) | 295,398 (2.29%) |
StageIV-1 | 16,179,709 (100.00%) | 2,200,713,831 (100.00%) | 15,877,084 (98.13%) | 9,491,808 (58.66%) | 6,385,276 (39.46%) | 302,625 (1.87%) |
StageIV-2 | 18,600,312 (100.00%) | 2,583,939,574 (100.00%) | 18,324,379 (98.52%) | 10,852,126 (58.34%) | 7,472,253 (40.17%) | 275,933 (1.48%) |
