Table 3 The 26 human microbial communities that passed the neutrality exact tests with Etienne sampling formula (V1-V3 region)*.

From: Testing the Neutral Theory of Biodiversity with Human Microbiome Datasets

Site	ID	J	S	θ	m	Log(L₀)	Log(L₁)	q-value	p-value
Throat	700110166	506	327	399.09	0.999978	−16.98	−15.5	2.962	0.0852
Left Antecubital fossa	700102129	808	47	10.73	0.999980	−57.89	−56.6	2.594	0.1072
Left Antecubital fossa	700113117	1462	80	18.05	0.999812	−79.40	−79.9	1.078	0.2990
Right Antecubital fossa	700106174	115	81	120.54	0.999998	−9.24	−8.2	2.088	0.1485
Right Antecubital fossa	700105936	139	16	4.47	0.995735	−19.55	−20.3	1.416	0.2341
Mid vagina	700015239	12512	343	65.04	0.979742	−249.36	−251.1	3.547	0.0597
Mid vagina	700016499	25053	498	88.27	0.999139	−359.68	−358.0	3.359	0.0668
Mid vagina	700110832	4375	164	33.58	0.999910	−144.54	−144.1	0.960	0.3272
Mid vagina	700023176	5815	168	32.25	0.999892	−163.09	−163.9	1.598	0.2062
Mid vagina	700033039	4670	160	31.90	0.999952	−148.08	−148.3	0.526	0.4683
Posterior fornix	700109404	4090	174	36.77	0.997910	−140.96	−139.9	2.089	0.1484
Posterior fornix	700110833	3537	145	30.25	0.999471	−127.48	−129.3	3.672	0.0553
Posterior fornix	700024357	8120	181	32.64	0.999853	−194.34	−192.9	2.875	0.0900
Posterior fornix	700024242	7460	179	32.85	0.998841	−186.94	−185.1	3.603	0.0577
Posterior fornix	700106808	10460	288	54.50	0.999765	−228.76	−227.0	3.474	0.0623
Posterior fornix	700023398	3980	153	31.39	0.999889	−135.71	−136.9	2.352	0.1251
Posterior fornix	700015577	8946	243	46.00	0.999900	−209.83	−208.0	3.618	0.0572
Vaginal introitus	700015455	9337	294	57.53	0.999909	−213.75	−215.1	2.673	0.1021
Vaginal introitus	700023640	7943	259	51.11	0.999965	−198.53	−197.5	2.011	0.1562
Vaginal introitus	700023453	8425	242	46.41	0.999901	−202.07	−202.6	0.973	0.3240
Vaginal introitus	700114121	6847	223	44.18	0.997384	−181.00	−182.7	3.437	0.0637
Vaginal introitus	700105207	7311	218	42.08	0.999904	−188.58	−188.3	0.475	0.4906
Vaginal introitus	700109402	4418	224	49.60	0.999936	−146.13	−145.6	1.095	0.2954
Vaginal introitus	700098286	2679	223	58.57	0.902479	−109.72	−108.7	2.020	0.1553
Vaginal introitus	700097310	2277	123	27.66	0.999520	−103.66	−102.9	1.446	0.2292
Vaginal introitus	700114273	1934	195	53.86	0.999516	−89.83	−89.4	0.899	0.3431

^*J: the total number of reads in the sample, S: the number of species in the sample, θ: fundamental biodiversity, m: immigration probability, Log(L₀) is the log-likelihood of the observed sample, Log(L₁) is the log-likelihood predicted by the neutral model, and q-value and p-value are the values of the likelihood ratios.

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Table 3 The 26 human microbial communities that passed the neutrality exact tests with Etienne sampling formula (V1-V3 region)*.

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