Table 1 General features of the PatMatch patterns, with a focus on those detected in proximity to the Danio rerio genes.

Number of PatMatch patterns

Number of gene-related patterns

Number of unique gene-related patterns

Genes (grouped by tipology)

Genes with more than one associated pattern

Number of reference transcripts

Number of patterns in the same orientation of genes

Number of genes in the same orientation of patterns

Proportion of patterns in 5′UTR

Proportion of patterns in upstream regions

Proportion of patterns within introns

Proportion of patterns within other gene regions

Proportion of gene-related patterns within repeats