Table 5 Genus-level taxonomic composition of the bacterial communities in the ruminal contents between the starter feed- and breast milk-fed groups.
From: Effects of early feeding on the host rumen transcriptome and bacterial diversity in lambs
Phylum | Genus | % of sequences in starter feed-fed group | % of sequences in breast milk-fed group | P-value |
|---|---|---|---|---|
Bacteroidetes | Prevotella | 40.370 ± 9.576 | 17.196 ± 5.925 | 0.067 |
|  | CF231 | 0.064 ± 0.000 | 1.613 ± 0.553 | 0.019 |
Fibrobacteres | Fibrobacter | 0.084 ± 0.050 | 0.750 ± 0.277 | 0.039 |
Firmicutes | Butyrivibrio | 0.821 ± 0.241 | 0.328 ± 0.075 | 0.079 |
|  | Ruminococcus | 3.240 ± 2.658 | 0.441 ± 0.123 | 0.318 |
|  | Acidaminococcus | 1.580 ± 0.426 | 0.001 ± 0.001 | 0.004 |
|  | Dialister | 3.721 ± 1.777 | 0.001 ± 0.001 | 0.063 |
|  | Succiniclasticum | 5.043 ± 1.399 | 0.765 ± 0.223 | 0.013 |
|  | Bulleidia | 2.512 ± 1.875 | 0.011 ± 0.006 | 0.210 |
|  | RFN20 | 0.006 ± 0.006 | 0.923 ± 0.473 | 0.081 |
Proteobacteria | Dechloromonas | 0.014 ± 0.007 | 1.420 ± 0.632 | 0.050 |
|  | Ruminobacter | 0.001 ± 0.001 | 0.864 ± 0.549 | 0.147 |
|  | Succinivibrio | 1.981 ± 1.178 | 1.014 ± 0.988 | 0.544 |
Spirochaetes | Sphaerochaeta | 6.617 ± 4.016 | 1.364 ± 0.537 | 0.224 |
|  | Treponema | 2.964 ± 2.951 | 3.187 ± 1.423 | 0.947 |
Synergistetes | Pyramidobacter | 1.048 ± 0.490 | 0.213 ± 0.060 | 0.122 |
Tenericutes | Anaeroplasma | 0 | 0.567 ± 0.325 | 0.112 |
Unclassified (Genus) | 27.919 ± 8.595 | 53.156 ± 6.044 | 0.037 | |
Others (<0.5%) | 0.019 ± 0.004 | 0.157 ± 0.027 | 0.000 | |
