Table 2 Nucleotide substitution in Large T Antigen.

From: A diverse virome in kidney transplant patients contains multiple viral subtypes with distinct polymorphisms

Reference genome/Sample

Subtype/Subgroup

Dunlop nucleotide position

Dunlop amino acid position

Nucleotide substitutions

Translated protein code

Dunlop

Ia

3997

1335

AAG

K (Lys)

SJH-LG-309

Ib1

AAG

K (Lys)

B9

Ib1

AGG

R (Arg)

Dunlop

Ia

4021

1343

GCT

A (Ala)

SJH-LG-309

Ib1

GCT

A (Ala)

B9

Ib1

GTT

V (Val)

Dunlop

Ia

4024

1344

CTT

L (Leu)

SJH-LG-309

Ib1

CTT

L (Leu)

B9

Ib1

CCT

P (Pro)

Dunlop

Ia

4050

1353

AAG

S (Ser)

SJH-LG-309

Ib1

AAG

S (Ser)

B9

Ib1

AGG

R (Arg)

  1. Note: Nucleotide substitutions are indicated in bold and underline.