Table 3 Differential mRNAs associated with muscle growth and development process by GO analysis.
Gene symbol | Description | QHMM (normalized counts) | STH (normalized counts) | Log2FoldChange | FDR | Style (STH vs.QHMM) | Enriched biological process |
|---|---|---|---|---|---|---|---|
BCL9L | B-cell CLL/lymphoma 9-like protein | 364.4 | 156.2 | −1.2 | 5.16E-03 | down | 7 |
BTG1 | Protein BTG1 | 670.5 | 3228.5 | 2.3 | 9.08E-05 | up | 4,10 |
CASQ1 | Calsequestrin | 45168.0 | 17353.3 | −1.4 | 5.41E-04 | down | 1,8 |
CASQ2 | Calsequestrin | 620.4 | 248.1 | −1.3 | 1.90E-02 | down | 8 |
CDH15 | Cadherin-15 | 122.5 | 263.7 | 1.1 | 1.66E-03 | up | 5 |
CITED2 | Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 2 | 155.9 | 289.7 | 0.9 | 2.54E-02 | up | 7 |
CSRP3 | cDNA, FLJ93801, Homo sapiens cysteine and glycine-rich protein 3 (cardiac LIMprotein) (CSRP3), mRNA | 4896.3 | 18425.4 | 2.0 | 4.61E-02 | up | 1,9 |
FHOD3 | FH1/FH2 domain-containing protein 3 | 502.7 | 172.0 | −1.5 | 0 | down | 8,9 |
FOXP1 | cDNA FLJ58267, highly similar to Forkhead box protein P1 | 233.3 | 382.1 | 0.7 | 2.45E-02 | up | 1,8 |
GPX1 | Glutathione peroxidase | 1529.1 | 761.9 | −1.0 | 1.22E-06 | down | 3 |
HEYL | cDNA FLJ52278, highly similar to Homo sapiens hairy/enhancer-of-split related with YRPW motif-like (HEYL), mRNA | 310.0 | 186.4 | −0.7 | 7.27E-05 | down | 7 |
HLF | Hepatic leukemia factor | 76.3 | 31.7 | −1.3 | 1.02E-04 | down | 7 |
ITGA7 | cDNA FLJ12486 fis, clone NT2RM2000566, highly similar to Integrin alpha-7 | 4307.8 | 1157.3 | −1.9 | 0 | down | 1 |
KIAA1161 | KIAA1161 ortholog | 661.6 | 214.7 | −1.6 | 1.19E-06 | down | 3 |
LMOD2 | cDNA FLJ50049, highly similar to Mus musculus leiomodin 2 (cardiac) (Lmod2), mRNA | 5623.4 | 12507.3 | 1.2 | 1.18E-08 | up | 9 |
MAFF | Transcription factor MafF | 73.1 | 239.3 | 1.7 | 1.89E-03 | up | 7 |
MYF6 | Myogenic factor 6 | 1688.6 | 4474.1 | 1.4 | 0 | up | 1,2,4,6,7,8,10 |
MYH6 | myosin, heavy chain 6, cardiac muscle, alpha | 12787.7 | 4502.7 | −1.5 | 1.17E-10 | down | 8,9 |
MYL2 | Myosin light chain 2 | 63933.5 | 23309.3 | −1.5 | 7.13E-12 | down | 9 |
MYL6B | myosin, light chain 6B, alkali, smooth muscle and non-muscle | 12018.3 | 1654.6 | −2.9 | 3.77E-02 | down | 1 |
MYLK3 | Myosin light chain kinase 3 | 265.8 | 94.1 | −1.5 | 6.03E-06 | down | 8,9 |
MYOD1 | Myoblast determination protein 1 | 232.5 | 37.5 | −2.6 | 3.46E-06 | down | 1,2,3,4,6,7,8,10 |
MYOG | Myogenin | 501.8 | 148.6 | −1.8 | 2.41E-04 | down | 1,2,3,4,6,7,8,10 |
NEO1 | Neogenin homolog 1 (Chicken), isoform CRA_a | 390.1 | 178.1 | −1.1 | 2.90E-06 | down | 5 |
OMYHCS | Myosin heavy chain slow | 225230.0 | 88659.7 | −1.3 | 3.66E-14 | down | 8,9 |
PPP3CB | Serine/threonine-protein phosphatase | 1978.0 | 1122.0 | −0.8 | 3.85E-02 | down | 3 |
RXRG | Retinoic acid receptor RXR-gamma | 1104.1 | 273.7 | −2.0 | 2.89E-06 | down | 1 |
SETD3 | SET domain containing 3, isoform CRA_a | 1297.1 | 719.0 | −0.9 | 1.02E-04 | down | 5 |
STAC3 | SH3 and cysteine rich domain 3, isoform CRA_a | 5060.1 | 2569.4 | −1.0 | 4.65E-03 | down | 3 |
XIRP1 | xin actin-binding repeat containing 1 | 7518.7 | 37631.7 | 2.3 | 1.11E-06 | up | 8 |
