Table 1 Molecular typing based on the complete VP1 sequences of Xinjiang isolates.
Isolates | Highest identity with the prototype (%) | Accession no. | ||||
|---|---|---|---|---|---|---|
Location1 | Cell line | Serotype | nucleotide | Amino acid | ||
HT-THLH02F/XJ/CHN/2011 | HT | RD | CV-A1 | 86.7 | 95.6 | JX174176 |
KS-ZPH01F/XJ/CHN/2011 | KS | RD | CV-A1 | 86.8 | 94.9 | JX174177 |
HT-MFH33F/XJ/CHN/2011 | HT | RD | CV-A1 | 86.9 | 95.6 | KU531400 |
KSJS-KZLSH17F/XJ/CHN/2011 | KS | RD | CV-A11 | 77.2 | 95.4 | KU531401 |
KSYPH-TRMH13F/XJ/CHN/2011 | KS | RD | CV-A11 | 77.5 | 95.7 | KU531402 |
KSYPH-TRMH15F/XJ/CHN/2011 | KS | RD | CV-A11 | 77.6 | 96.1 | KU531403 |
KSSC-KQH172F/XJ/CHN/2011 | KS | RD | CV-A11 | 77.6 | 95.4 | KU531404 |
KSSC-KQH173F/XJ/CHN/2011 | KS | RD | CV-A11 | 77.6 | 95.4 | KU531405 |
HT-BZKH06F/XJ/CHN/2011 | HT | RD | CV-A11 | 78.1 | 95.7 | KU531406 |
KSYPH-TRMH28F/XJ/CHN/2011 | KS | RD | CV-A13 | 74.4 | 90.3 | KU531407 |
KSYPH-TRMH20F/XJ/CHN/2011 | KS | RD | CV-A17 | 77.7 | 94.8 | KU531408 |
KSSC-THQH133F/XJ/CHN/2011 | KS | RD | CV-A17 | 77.6 | 95.4 | KU531409 |
KSSC-YGQH122F/XJ/CHN/2011 | KS | RD | CV-A17 | 78.5 | 95.8 | KU531410 |
KSSC-THQH130F/XJ/CHN/2011 | KS | RD | CV-A17 | 78.6 | 95.1 | KU531411 |
KSSC-YXKLH02F/XJ/CHN/2011 | KS | RD | CV-A17 | 77.2 | 94.4 | KU531412 |
KSSC-YXKLH04F/XJ/CHN/2011 | KS | RD | CV-A17 | 77.1 | 95.1 | KU531413 |
KS-YPHH01F/XJ/CHN/2011 | KS | HEp-2 | CV-A17 | 78.1 | 95.4 | KU531414 |
KS-YPHH02F/XJ/CHN/2011 | KS | HEp-2 | CV-A17 | 78.1 | 95.4 | KU531415 |
KZ-ATSH01F/XJ/CHN/2011 | KZ | RD | CV-A20 | 78.3 | 92.8 | KU531416 |
KSYPH-TRMH19F/XJ/CHN/2011 | KS | RD | CV-A20 | 77.2 | 92.1 | KU531417 |
KSSC-KQH171F/XJ/CHN/2011 | KS | RD | CV-A20 | 77.7 | 93.1 | KU531418 |
HTLP-NWH201F/XJ/CHN/2011 | HT | RD | CV-A20 | 77.4 | 91.5 | KU531419 |
AKS-XHH07F/XJ/CHN/2011 | AKS | RD | CV-A24 | 77.9 | 91.8 | KU531420 |
KSSC-THQH128F/XJ/CHN/2011 | KS | RD | CV-A24 | 79.2 | 93.4 | KU531421 |
HTMY-JHBGH01/XJ/CHN/2011 | HT | RD | CV-A24 | 78.9 | 93.1 | KU531422 |
AKS-WSH01F/XJ/CHN/2011 | AKS | HEp-2 | CV-A24 | 75.7 | 92.1 | KU531423 |
HTMY-KYH06/XJ/CHN/2011 | HT | HEp-2 | CV-A24 | 77.6 | 91.5 | KU531424 |
HTMY-KYH02/XJ/CHN/2011 | HT | HEp-2 | CV-A24 | 77.5 | 91.5 | KU531425 |
HTMY-KYH09/XJ/CHN/2011 | HT | HEp-2 | CV-A24 | 77.3 | 91.1 | KU531426 |
KSSC-WDLKH01F/XJ/CHN/2011 | KS | RD | CV-A24 | 78.0 | 92.5 | KU531427 |
HTYT-ARTH68F/XJ/CHN/2011 | HT | HEp-2 | EV-C96 | 79.6 | 93.2 | KU531428 |
HT-THLH01F/XJ/CHN/2011 | HT | RD | EV-C96 | 79.5 | 93.2 | KU531429 |
KSMGT-YTKH21F/XJ/CHN/2011 | KS | RD | EV-C96 | 79.4 | 92.2 | KU531430 |
KSMGT-YTKH20F/XJ/CHN/2011 | KS | HEp-2 | EV-C99 | 76.1 | 90.8 | KU531431 |
HT-XEBGH09F/XJ/CHN/2011 | HT | HEp-2 | EV-C99 | 76.4 | 87.5 | KF129411 |
KSSC-ALXHH01F/XJ/CHN/2011 | KS | HEp-2 | EV-C99 | 75.8 | 88.8 | KF129412 |
