Table 1 The details of off-targets of gefitinib identified through MIF similarity serach analysis.

From: Identification of gefitinib off-targets using a structure-based systems biology approach; their validation with reverse docking and retrospective data mining

S. No.

Gene names

PDB ID

UniprotKB ID

Pfam ID

Organism

Functions

Locations

1

BMPR1B

3MDY

O00238

PF08515

Human

positive regulation of chondrocyte differentiation

cell membrane

2

SRC SRC1

1YOL, 1Y57 3EN5, 3EN7, 3EN4

P12931 P00523

PF07714

Human Chicken

regulation of cytoskeletal organization, activation of EGF-mediated calcium- chloride channel

cell membrane, mitochondrial inner membrane, nucleus, cytoplasm

3

FGFR2 BEK KGFR KSAM

3RI1, 1OEC

P21802

PF07714

Human

regulates the cell proliferation, differentiation, migration, apoptosis, and embryonic development

cell membrane, Golgi apparatus, cytoplasmic vesicles

4

ACVRL1 ACVRLK1 ALK1

3MY0

P37023

PF08515

Human

regulator of normal blood vessel development

cell membrane

5

MAPK8 JNK1 PRKM8 SAPK1 SAPK1C

3ELJ

P45983

PF00069

Human

regulates the circadian clock

cytoplasm, nucleus

6

ALK

2XBA

Q9UM73

ALK_HUMAN

Human

genesis and differentiation of the nervous system

cell membrane

7

Comp

1FBM

P35444

COMP_RAT

Rat

regulates structural integrity of cartilage

extra cellular matrix

8

AURKA AIK AIRK1 ARK1 AURA AYK1 BTAK IAK1 STK15 STK6

3LAU, 3UOH

O14965

PF00069

Human

regulates cell cycle progression

cytoplasm, cytoskeleton, microtubule organizing center, centrosome

9

DMPK DM1PK MDPK

2VD5

Q09013

DMPK_HUMAN

Human

maintains skeletal muscle structure and function

cell membrane, ER membrane, mitochondrial outer membrane

10

SLK KIAA0204 STK2

2J51

Q9H2G2

PF00069

Human

mediates apoptosis and actin stress fiber dissolution

cytoplasm

11

ERBB4 HER4

2R4B

Q15303

PF07714

Human

regulates development of the heart, the central nervous system and the mammary gland, promote apoptosis

cell membrane, nucleus and mitochondria

12

ttgR T1E_0244

2UXH

Q9AIU0

TTGR_PSEPT

Pseudomonas putida (strain DOT-T1E)

responsible for antibiotics resistance

not known

13

TNK2 ACK1

3EQR

Q07912

ACK1_HUMAN

Human

involved in trafficking and clathrin-mediated endocytosis

cell membrane, nucleus, endosome

14

EGFR ERBB ERBB1 HER1

3UG2, 3LZB

P00533

EGFR_HUMAN

Human

activates several signal cascades

cell membrane, ER membrane nucleus membrane, Golgi membrane, endosome

15

STK25 SOK1 YSK1

2XIK

O00506

STK25_HUMAN

Human

response against environmental stress

cytoplasm, Golgi apparatus

16

LCK

3KMM, 3KXZ, 3ACK, 3MPM, 3AC3, 3AC2, 3AD4

P06239

LCK_HUMAN

Human

responsible for selection and maturation of developing T-cells

cytoplasm, cell membrane

17

IGF1R

2ZM3

P08069

IGF1R_HUMAN

Human

involved in cell growth and survival control

cell membrane

18

CHEK1 CHK1

2HOG, 2E9N, 4FTI, 4FSR, 2XF0, 2HXL, 4FTQ, 2HY0, 4FT3, 4FTN, 2BRB, 2BRH, 2XEY, 4FTO, 2QHM, 2E9U, 4FT0, 3UN9, 4FTC, 2BR1

O14757

CHK1_HUMAN

Human

required for cell cycle arrest and activation of DNA repair

nucleus, cytoplasm

19

PRKCI DXS1179E

1ZRZ

P41743

KPCI_HUMAN

Human

Plays a protective role against apoptotic stimuli

cytoplasm, membrane, nucleus, endosome

20

MAP3K9 MLK1 PRKE1

3DTC

P80192

M3K9_HUMAN

Human

role in the cascades of cellular responses

intracellular

21

FGFR1 BFGFR CEK FGFBR FLG FLT2 HBGFR

3TT0, 4F64

P11362

FGFR1_HUMAN

Human

essential for regulation of embryonic development, cell proliferation, differentiation and migration

cytoplasm, cell membrane, nucleus, cytoplasmic vesicles

22

MAPK14 CSBP CSBP1 CSBP2 CSPB1 MXI2 SAPK2A

1DI9, 3FLW, 3KF7, 3ROC, 3IW7, 3FLZ, 3MVM, 2ZB1, 2RG6, 1WBW

Q16539

MK14_HUMAN

Human

essential component of the MAP kinase signal transduction pathways responsible for activating the cascades of cellular responses

cytoplasm. nucleus

23

KIT SCFR

3G0E

P10721

KIT_HUMAN

Human

responsible for regulation of hematopoiesis, stem cell maintenance, gametogenesis, mast cell development, and in melanogenesis

cytoplasm, cell membrane

24

STK17B DRAK2

3LM0

O94768

ST17B_HUMAN

Human

positive regulator of apoptosis

cell membrane, nucleus

25

aurkb-a airk2-a

2VRX

Q6DE08

AUKBA_XENLA

Xenopus laevis

key regulator of mitosis

nucleus, chromosomes

26

ACK2

1ZOH

P28523

CSK2A_MAIZE

Zea mays (Maize)

utilizes acidic proteins

not known

27

ABL1 ABL JTK7

3UE4, 3KF4 (Mouse)

P00519

ABL1_HUMAN

Human

responsible for cell growth and survival

cytoplasm, nucleus, mitochondria

28

MAPK10 JNK3 JNK3A PRKM10 SAPK1B

2O2U, 4Z9L, 3CGO, 2O0U, 3TTJ, 2ZDT

P53779

MK10_HUMAN

Human

involved in neuronal proliferation, differentiation, migration and programmed cell death

cytoplasm. nucleus, mitochondria, membrane

29

MAPKAPK2

3KA0

P49137

MAPK2_HUMAN

Human

involved in cytokine production, endocytosis, reorganization of the cytoskeleton, chromatin remodeling and DNA damage response

cytoplasm, nucleus

30

BTK AGMX1 ATK BPK

3PJ1, 3PJ2, 3OCT

Q06187

BTK_HUMAN

Human

Vital for B lymphocyte development, differentiation and signaling

cytoplasm. nucleus, cell membrane

31

ACVR1 ACVRLK2

3MTF, 3OOM

Q04771

ACVR1_HUMAN

Human

involved for left-right pattern formation during embryogenesis

membrane

32

SYK

1XBC

P43405

KSYK_HUMAN

Human

regulates innate and adaptive immunity, cell adhesion, osteoclast maturation, platelet activation and vascular development

cytoplasm, cell membrane

33

EPHB4 HTK MYK1 TYRO11

2VX1, 2VWU, 2×9F, 2VWX, 2VWW

P54760

EPHB4_HUMAN

Human

important in tumor angiogenesis

cell membrane

34

CDPK1

3T3U, 3NYV, 3MWU, 3MA6

Q9BJF5A3FQ16

Q9BJF5_TOXGO A3FQ16_CRYPI

Toxoplasma gondii Cryptosporidium parvum (strain Iowa II)

binds with metals and nucleotides

not known

35

CDK6 CDKN6

3NUX

Q00534

CDK6_HUMAN

Human

controls cell cycle and differentiation

cytoplasm. nucleus

36

DHODH

3F1Q

Q02127

PYRD_HUMAN

Human

catalyzes the conversion of dihydroorotate to orotate

mitochondrial inner membrane

37

CDK2 CDKN2

3EZV, 2UZD, 2IW6, 3R6X, 1DI8, 2VTQ, 2VU3, 2W17, 3R1Q, 1GIJ

P24941

CDK2_HUMAN

Human

control of the cell cycle; essential for meiosis, but non-essential for mitosis

cytoplasm. nucleus, endosome

38

PIM1

3MA3, 2O65, 3R04, 3T9I, 3VBY, 3UMX, 4ENY, 3CY3, 3JY0

P11309

PIM1_HUMAN

Human

involved in cell survival and cell proliferation, provide advantage in tumorigenesis

cytoplasm. nucleus, cell membrane

39

STK10 LOK

4BC6

O94804

STK10_HUMAN

Human

regulates lymphocyte migration

cell membrane

40

Mapk1 Erk2 Mapk Prkm1

2Z7L

P63086

MK01_RAT

Rat

plays important role in the MAPK/ERK cascade

cytoplasm, nucleus

41

PRKACA PKACA

3AMB, 1SZM

P17612 P00517

KAPCA_HUMAN KAPCA_BOVIN

Human Bovine

involved in the regulation of platelets

cytoplasm. nucleus, cell membrane, mitochondria

42

ITK EMT LYK

3T9T, 3V8T

Q08881

ITK_HUMAN

Human

involved in regulation of the adaptive immune response

cytoplasm

43

MET

3ZZE

P08581

MET_HUMAN

Human

mediates entry of the pathogen into cells

membrane

44

CHK2

2YCQ, 2YIT

O96017

CHK2_HUMAN

Human

required for checkpoint-mediated cell cycle arrest

nucleus

45

TTK

3HMO

P33981

TTK_HUMAN

Human

associated with cell proliferation

membrane, spindle

46

NTRK1

4AOJ

P04629

NTRK1_HUMAN

Human

involved in the development and the maturation of the central and peripheral nervous systems

cell membrane, early endosome membrane, late endosome membrane

47

TTR

1KGJ

P02767

TTHY_RAT

Rat

transports thyroxine from the bloodstream to the brain

secreted

48

HSD17B1

3DHE

P14061

DHB1_HUMAN

Human

has 20-alpha-HSD activity

cytoplasm

49

METF

3FSU

P0AEZ1

METF_ECOLI

E.coli

converts homocysteine to methionine

cytosol

50

BETVIA

4A84

P15494

BEV1A_BETPN

Betula pendula

steroid carrier protein

cytoplasm