Table 2 List of proteins up-regulated in embryos of germinated rice seeds in response to BR-deficiency and BR-insensitivity by iTRAQ.
Gene ID | NIP(BRZ/Mock) fold change | d61/NIP fold change | Protein score | Unique Peptide | Sequence coverage(%) | Description |
|---|---|---|---|---|---|---|
Os01g0294700 | 1.239 | 1.317 | 707 | 8 | 33.7 | Haem peroxidase, plant/fungal/bacterial family protein. |
Os01g0348700 | 1.319 | 1.552 | 422 | 3 | 20.4 | Similar to 60S ribosomal protein L23a (L25). |
Os01g0358400 | 1.259 | 1.475 | 2745 | 1 | 43.4 | Similar to 40S ribosomal protein S4. |
Os01g0815800 | 2.061 | 2.224 | 682 | 1 | 19.8 | Similar to 60S ribosomal protein L24-A (L30A) (RP29). |
Os01g0880800 | 1.585 | 1.835 | 891 | 5 | 16.8 | Similar to Acyl-[acyl-carrier-protein] desaturase |
Os01g0896700 | 1.268 | 1.701 | 902 | 3 | 34.5 | Similar to 60S ribosomal protein L5. |
Os02g0503400 | 1.29 | 1.229 | 99 | 2 | 13.8 | Similar to 60S ribosomal protein L35. |
Os02g0550100 | 1.38 | 1.726 | 419 | 1 | 10.8 | Similar to Vacuolar ATP synthase 16 kDa proteolipid |
Os02g0591800 | 1.347 | 1.451 | 86 | 3 | 13 | Brix domain containing protein. |
Os02g0675700 | 1.741 | 1.617 | 236 | 4 | 18.4 | methyltransferase putative family protein. |
Os02g0804100 | 1.486 | 2.092 | 242 | 1 | 16.1 | Similar to predicted protein. |
Os03g0118800 | 1.486 | 1.8 | 176 | 3 | 12.7 | Similar to Hydroxymethylglutaryl-CoA synthase. |
Os03g0264400 | 1.317 | 1.225 | 186 | 4 | 11.2 | Anthranilate synthase alpha 2 subunit. |
Os03g0341100 | 1.234 | 1.265 | 506 | 4 | 28.3 | Similar to 60S ribosomal protein L18. |
Os03g0577000 | 1.222 | 1.377 | 1613 | 6 | 45.6 | Similar to Ribosomal protein S3. |
Os03g0700400 | 1.297 | 1.399 | 1056 | 3 | 37.3 | Similar to LOX4. |
Os03g0720300 | 1.384 | 1.884 | 452 | 5 | 26.6 | Similar to Glutamate decarboxylase isozyme 1. |
Os03g0799000 | 1.997 | 2.018 | 126 | 2 | 18.4 | Similar to Histone H1. |
Os03g0823700 | 1.307 | 1.421 | 564 | 3 | 40.9 | Similar to Ras-related protein Rab11C. |
Os04g0249600 | 1.371 | 1.389 | 151 | 2 | 23.9 | Rhodanese-like domain containing protein. |
Os04g0497200 | 1.275 | 1.348 | 169 | 4 | 9.3 | Cellulase precursor (Cellulase homolog OR16pep). |
Os05g0103100 | 1.298 | 1.36 | 788 | 3 | 23.1 | Translocon-associated beta family protein. |
Os05g0486700 | 1.676 | 1.457 | 509 | 1 | 19.9 | Ribosomal protein L24e domain containing protein. |
Os05g0494000 | 1.334 | 1.492 | 231 | 6 | 13.9 | Similar to Cytochrome P450 98A1. |
Os05g0512600 | 1.221 | 1.224 | 365 | 2 | 15.4 | X8 domain containing protein. |
Os05g0555800 | 1.545 | 1.474 | 290 | 2 | 37.5 | Similar to 60S ribosomal protein L35a-3. |
Os07g0448800 | 1.255 | 1.309 | 531 | 5 | 18.3 | Aquaporin. |
Os07g0500300 | 1.293 | 1.563 | 303 | 3 | 32.4 | C2 calcium-dependent membrane targeting domain protein. |
Os07g0608700 | 1.423 | 1.474 | 124 | 2 | 32.5 | Similar to small nuclear ribonucleoprotein G. |
Os07g0688800 | 1.321 | 1.266 | 248 | 4 | 8.5 | Aldehyde dehydrogenase domain containing protein. |
Os08g0117300 | 1.283 | 1.39 | 2212 | 3 | 57 | Similar to 40S ribosomal protein S13. |
Os08g0465800 | 1.304 | 1.291 | 952 | 8 | 33.4 | Similar to Glutamate decarboxylase. |
Os08g0555200 | 1.298 | 1.381 | 238 | 3 | 6.7 | Nonaspanin (TM9SF) family protein. |
Os09g0485900 | 1.294 | 1.256 | 1741 | 1 | 41.1 | Similar to 60S ribosomal protein L9. |
Os10g0355800 | 1.391 | 1.221 | 2143 | 4 | 38.1 | Similar to ATP synthase CF1 beta subunit. |
Os10g0571200 | 1.256 | 1.679 | 424 | 6 | 18.8 | Similar to Pyruvate kinase isozyme G, chloroplast. |
Os11g0168200 | 1.322 | 1.503 | 1855 | 11 | 28 | 60S ribosomal protein L3. |
Os11g0169800 | 1.576 | 1.457 | 100 | 3 | 11.3 | Similar to Long-chain-fatty-acid–CoA ligase 4. |
Os11g0210500 | 1.25 | 1.581 | 1940 | 6 | 39.8 | Similar to Alcohol dehydrogenase. |
Os11g0256050 | 1.221 | 1.225 | 177 | 4 | 22.1 | Hypothetical conserved gene. |
Os11g0602200 | 1.41 | 1.744 | 219 | 3 | 6.4 | Similar to SET domain protein SDG111. |
Os12g0506400 | 1.387 | 1.415 | 95 | 1 | 6.7 | Cornichon family protein. |
