Table 3 Comparison of 3D genome browsers.

Web server or software	Hi-C heatmap display	Annotation tracks	Gene search	Disease search	GWAS variants search	3D model display	PubMed ID	Website
3Disease Browser	✓	✓	✓	✓		✓	—	http://3dgb.cbi.pku.edu.cn/disease
ChromContact		✓	✓		✓		26666652	http://bioinfo.sls.kyushu-u.ac.jp/chromcontact/
HiView		✓	✓	✓	✓		26969411	http://www.unc.edu/~yunmli/HiView/
Hi-C data Browser (Dekker lab)	✓						—	http://hic.umassmed.edu/welcome/welcome.php
HiC-3DViewer	✓	✓				✓	—	http://bioinfo.au.tsinghua.edu.cn/member/nadhir/HiC3DViewer
Hi-C data Browser (Yue lab)	✓	✓					—	http://yuelab.org/hi-c/database.php
WashU EpiGenome Browser (Wang lab)	✓	✓	✓		✓		23629413	http://vizhub.wustl.edu/
Juicebox (Lieberman- Aiden lab)	✓	✓					25497547	http://www.aidenlab.org/juicebox/
4DGenome Browser		✓	✓				25788621	http://4dgenome.int-med.uiowa.edu
Genomic HyperBrowser		✓					21182759	https://hyperbrowser.uio.no/hb/
GMOL						✓	26868282	https://sourceforge.net/projects/gmol/
Genome3D						✓	25348407	http://www.genome3d.eu
Tadkit		✓				✓	—	http://sgt.cnag.cat/3dg/tadkit/

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