Table 1 Primers used for single cell RT-PCR.

From: CXCL13/CXCR5 enhances sodium channel Nav1.8 current density via p38 MAP kinase in primary sensory neurons following inflammatory pain

Target gene (product length)

Outer primers

Inner primers

NCBI Reference Sequence

CXCR5 (445 bp, 274 bp)

5′-CTGTCTCAATCCCATGCTCTAC-3′

5′-CAGAGAATGCTACTTCCCTCAC-3′

NM_007551.2

5′-CCCTATGGCCAGGAAGAAATAA-3′

5′-GCTTAGCTTTAGCTGGTTAGGA-3′

Nav1.8 (316 bp, 203 bp)

5′-CATGACAGAGGAGCAGAAGAAG-3′

5′-CTTTGAATAAGTACCAGGGCTTC-3′

NM_001205321.1

5′-CCAGCCGTTGGTGAAGTAATA-3′

5′-GAACATCTTCATCACACACTCG-3′

NeuN (357 bp, 86 bp)

5′-AGACAGACAACCAGCAACTC-3′

5′-ACGATCGTAGAGGGACGGAA-3′

NM_001039167.1

5′-CTGTTCCTACCACAGGGTTTAG-3′

5′-TTGGCATATGGGTTCCCAGG-3′

GAPDH (367 bp, 313 bp)

5′-AGCCTCGTCCCGTAGACAAAA-3′

5′-TGAAGGTCGGTGTGAACGAATT-3′

NM_008084.3

5′-TTTTGGCTCCACCCCTTCA-3′

5′-GCTTTCTCCATGGTGGTGAAGA-3′