Table 1 Comparison among the TT8 assembly, JGI 8x v2 Sitalica_164 and Millet_scaffoldVersion2.3.
Statistic | TT8 | JGI 8x v2 Sitalica_164 | Millet_scaffoldVersion2.3 |
|---|---|---|---|
# scaffolds | 2,688 | 336 | 3,269 |
Largest scaffold (bp) | 65,039,919 | 58,970,518 | 4,589,508 |
Total length (bp) | 477,547,503 | 405,737,341 | 423,359,136 |
N50 (bp) | 53,212,001 | 47,253,416 | 1,007,752 |
N75 (bp) | 42,684,089 | 40,408,058 | 572,782 |
N95 (bp) | 39,546,705 | 35,964,515 | 123,677 |
L50 | 5 | 4 | 136 |
L75 | 7 | 7 | 265 |
L95 | 9 | 9 | 548 |
GC% | 46.2 | 46.14 | 45.88 |
# N’s (bases) | 3,381,668 | 4,826,887 | 26,194,380 |
# of gaps (sites of Ns) | 7,136 | 6,455 | 34,282 |
CEGMA completeness | 95.16% | 94.76% | 95.97% |
