Table 1 GSEA of top 50 genes correlating with MenaCalc, ENAH (Mena), and Mena11a in COAD cohort.
MenaCalc | ||
Gene Set Name | # of Genes in Overlap (k)/# Genes in Gene Set (K) | FDR q-value |
HALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION | 6/200 | 1.88E-04 |
Mena | ||
Gene Set Name | # of Genes in Overlap (k)/# Genes in Gene Set (K) | FDR q-value |
BIOPOLYMER_METABOLIC_PROCESS | 12/1684 | 3.26E-04 |
REACTOME_YAP1_AND_WWTR1_TAZ_STIMULATED_GENE_EXPRESSION | 3/24 | 2.50E-03 |
REACTOME_DEVELOPMENTAL_BIOLOGY | 6/396 | 2.67E-03 |
REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION | 4/104 | 2.67E-03 |
REACTOME_CIRCADIAN_CLOCK | 3/53 | 1.13E-02 |
Mena11a | ||
Gene Set Name | # of Genes in Overlap (k)/# Genes in Gene Set (K) | FDR q-value |
BIOPOLYMER_METABOLIC_PROCESS | 12/1684 | 4.14E-04 |
RNA_METABOLIC_PROCESS | 7/841 | 2.77E-02 |
TRANSCRIPTION_DNA_DEPENDENT | 6/636 | 2.77E-02 |
RNA_BIOSYNTHETIC_PROCESS | 6/638 | 2.77E-02 |
BIOPOLYMER_MODIFICATION | 6/650 | 2.77E-02 |