Table 2 Mutations identified in the WS probands.

From: Molecular etiology and genotype-phenotype correlation of Chinese Han deaf patients with type I and type II Waardenburg Syndrome

Proband

Gene

Mutation type

Nucletide change*

Amino acid change

Allele frequencies in

Novelty

De novo

ExAC

1000 Genomes

300 Chinese Han controls

W2-1

PAX3

Nonsense

c.667C>T

p.R223X

0.000008241

0

0

Reported1

Yes

D3-1

PAX3

Nonsense

c.667C>T

p.R223X

0.000008241

0

0

Reported1

Unknown

B5-1

PAX3

Nonsense

c.784C>T

p.R262X

0

0

0

Reported2

Unknown

W24-1

PAX3

Deletion

Unspecified**

Unspecified**

0

0

0

Novel

No

W9-1

PAX3

Splice site

c.1174-2A>T

p.V392fs

0

0

0

Novel

No

W22-1

PAX3

Missense

c.248T>G

p.V83G

0

0

0

Novel

Unknown

W8-1

SOX10

Frameshift indel

c.1083delG

p.G362fs

0

0

0

Novel

Yes

W10-1

SOX10

Frameshift indel

c.1074delA

p.E359fs

0

0

0

Novel

Unknown

W11-1

SOX10

Frameshift indel

c.495-496insA

p.D167fs

0

0

0

Novel

Unknown

W12-1

SOX10

Frameshift indel

c.36-54del19bp

p.V15fs

0

0

0

Novel

Unknown

D680-1

SOX10

Frameshift indel

c.400delC

p.134Lfs

0

0

0

Novel

Unknown

W25-1

SOX10

Frameshift indel

c.1095delG

p.G366fs

0

0

0

Novel

Yes

W47-1

SOX10

Frameshift indel

c.690delC

p.H230fs

0

0

0

Novel

Yes

W3-1

SOX10

Nonsense

c.119C>A

p.S40X

0

0

0

novel

Unknown

W4-1

SOX10

Nonsense

c.589C>T

p.Q197X

0

0

0

novel

No

W23-1

SOX10

Nonsense

c.255G>A

p.W85X

0

0

0

Reported3

Yes

W26-1

SOX10

Non-frameshift indel

c.396-397ins21bp

p.132_133ins7aa

0

0

0

Novel

Yes

W17-1

SOX10

Missense

c.340T>C

p.W114R

0

0

0

Novel

Yes

W27-1

SOX10

Missense

c.326A>G

p.N109S

0

0

0

Novel

Yes

W44-1

MITF

Frameshift indel

c.494delC

p.P165fs

0

0

0

Novel

No

W14-1

MITF

Nonsense

c.328C>T

p.R110X

0

0

0

Reported4

No

W21-1

MITF

Nonsense

c.763C>T

p.R255X

0

0

0

Reported6

Unknown

W46-1

MITF

Nonsense

c.763C>T

p.R255X

0

0

0

Reported6

No

D2-1

MITF

Nonsense

c.775C>T

p.R259X

0

0

0

Reported7

Unknown

W19-1

MITF

Nonsense

c.808C>T

p.R270X

0

0

0

Novel

No

W18-1

MITF

Splice site

c.710+1G>T

p.P237fs

0

0

0

Reported5

Unknown

W16-4

MITF

No-stop

c.1258T>C

p.X420Qext51

0

0

0

Novel

No

W33-1

MITF

Missense

c.641G>A

p.R214Q

0

0

0

Novel

No

  1. *The referenced sequences are NM_181459 for PAX3, NM_006941 for SOX10 and NM_000248 for MITF.
  2. **Suggested by haplotype non-segregation of a PAX3 p.T31S variant in Family W24.