Table 2 Mutations identified in the WS probands.
Proband | Gene | Mutation type | Nucletide change* | Amino acid change | Allele frequencies in | Novelty | De novo | ||
---|---|---|---|---|---|---|---|---|---|
ExAC | 1000 Genomes | 300 Chinese Han controls | |||||||
W2-1 | PAX3 | Nonsense | c.667C>T | p.R223X | 0.000008241 | 0 | 0 | Reported1 | Yes |
D3-1 | PAX3 | Nonsense | c.667C>T | p.R223X | 0.000008241 | 0 | 0 | Reported1 | Unknown |
B5-1 | PAX3 | Nonsense | c.784C>T | p.R262X | 0 | 0 | 0 | Reported2 | Unknown |
W24-1 | PAX3 | Deletion | Unspecified** | Unspecified** | 0 | 0 | 0 | Novel | No |
W9-1 | PAX3 | Splice site | c.1174-2A>T | p.V392fs | 0 | 0 | 0 | Novel | No |
W22-1 | PAX3 | Missense | c.248T>G | p.V83G | 0 | 0 | 0 | Novel | Unknown |
W8-1 | SOX10 | Frameshift indel | c.1083delG | p.G362fs | 0 | 0 | 0 | Novel | Yes |
W10-1 | SOX10 | Frameshift indel | c.1074delA | p.E359fs | 0 | 0 | 0 | Novel | Unknown |
W11-1 | SOX10 | Frameshift indel | c.495-496insA | p.D167fs | 0 | 0 | 0 | Novel | Unknown |
W12-1 | SOX10 | Frameshift indel | c.36-54del19bp | p.V15fs | 0 | 0 | 0 | Novel | Unknown |
D680-1 | SOX10 | Frameshift indel | c.400delC | p.134Lfs | 0 | 0 | 0 | Novel | Unknown |
W25-1 | SOX10 | Frameshift indel | c.1095delG | p.G366fs | 0 | 0 | 0 | Novel | Yes |
W47-1 | SOX10 | Frameshift indel | c.690delC | p.H230fs | 0 | 0 | 0 | Novel | Yes |
W3-1 | SOX10 | Nonsense | c.119C>A | p.S40X | 0 | 0 | 0 | novel | Unknown |
W4-1 | SOX10 | Nonsense | c.589C>T | p.Q197X | 0 | 0 | 0 | novel | No |
W23-1 | SOX10 | Nonsense | c.255G>A | p.W85X | 0 | 0 | 0 | Reported3 | Yes |
W26-1 | SOX10 | Non-frameshift indel | c.396-397ins21bp | p.132_133ins7aa | 0 | 0 | 0 | Novel | Yes |
W17-1 | SOX10 | Missense | c.340T>C | p.W114R | 0 | 0 | 0 | Novel | Yes |
W27-1 | SOX10 | Missense | c.326A>G | p.N109S | 0 | 0 | 0 | Novel | Yes |
W44-1 | MITF | Frameshift indel | c.494delC | p.P165fs | 0 | 0 | 0 | Novel | No |
W14-1 | MITF | Nonsense | c.328C>T | p.R110X | 0 | 0 | 0 | Reported4 | No |
W21-1 | MITF | Nonsense | c.763C>T | p.R255X | 0 | 0 | 0 | Reported6 | Unknown |
W46-1 | MITF | Nonsense | c.763C>T | p.R255X | 0 | 0 | 0 | Reported6 | No |
D2-1 | MITF | Nonsense | c.775C>T | p.R259X | 0 | 0 | 0 | Reported7 | Unknown |
W19-1 | MITF | Nonsense | c.808C>T | p.R270X | 0 | 0 | 0 | Novel | No |
W18-1 | MITF | Splice site | c.710+1G>T | p.P237fs | 0 | 0 | 0 | Reported5 | Unknown |
W16-4 | MITF | No-stop | c.1258T>C | p.X420Qext51 | 0 | 0 | 0 | Novel | No |
W33-1 | MITF | Missense | c.641G>A | p.R214Q | 0 | 0 | 0 | Novel | No |