Figure 2 | Scientific Reports

Figure 2

From: Genomic, physiologic, and proteomic insights into metabolic versatility in Roseobacter clade bacteria isolated from deep-sea water

Figure 2

Metabolic pathways and transporter systems shared by T. profunda JLT2016 and P. abyssi JLT2014 based on functional genomics.

The cytoplasmic membrane is depicted in grey. Different color arcs represent nutrient and energy metabolic pathways. Transporter systems are detailed in Supplementary Table S2. CBB, Calvin-Benson-Bassham cycle; Sox, the Sox multi-enzyme system; cbb3, cytochrome oxidase cbb3; cytbc1, cytochrome bc1 complex; Cytc, cytochrome c protein; UQ, ubiquinone; NAD(P)H, NADH (or NADPH)-quinone oxidoreductases; EMP, Embden-Meyerhof-Parnas; ED, Entner-Doudoroff; PP, pentose phosphate pathway; PEP, phosphoenolpyruvate; PHB, poly-3-hydroxybutyrate; ABC, ATP-binding cassette transporter systems; TRAP, tripartite ATP-independent periplasmic systems; MFS, major facilitator superfamily; Anti, antiporter; Sym, symporter; Sulp, sulfate or bicarbonate transporter; AMT, ammonium transporter.

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