Table 1 Changes in the expression of genes related to the sulfur metabolism in tomatoes infected by V. dahliae in the tomato/potato onion companion cropping (nā€‰=ā€‰3).

From: Physiological response and sulfur metabolism of the V. dahliae-infected tomato plants in tomato/potato onion companion cropping

Gene ID

Expression fold (TC/TM)

Probability

Description

Solyc09g082550.2.1

17.63

0.848035694

High affinity sulfate transporter 2

Solyc03g005260.2.1

3.59

0.858635510

Sulfate adenylyltransferase

Solyc02g032860.2.1

4.19

0.862731753

Adenylyl-sulfate reductase

Solyc08g083110.2.1

3.16

0.821302983

Cystathionine gamma-lyase

Solyc10g012370.2.1

3.34

0.846850935

Cysteine synthase

Solyc09g011620.1.1

9.13

0.896062565

Glutathione S-transferase-like protein

Solyc09g011540.2.1

13.21

0.903839125

Glutathione S-transferase-like protein

Solyc01g081250.2.1

24.54

0.902061986

Glutathione-S-transferase

Solyc03g111720.2.1

2.76

0.815851829

Peptide methionine sulfoxide reductase

Solyc02g089610.1.1

2.86

0.83312537

S-adenosylmethionine decarboxylase proenzyme

Solyc04g040180.2.1

4.69

0.871623751

S-adenosylmethionine-dependent methyltransferase

Solyc01g095080.2.1

13.46

0.894367351

1-aminocyclopropane-1-carboxylate synthase

Solyc07g026650.2.1

15.26

0.819387202

1-aminocyclopropane-1-carboxylate oxidase

  1. Note: TM indicates tomato monoculture; TC indicates tomato grown with potato onions. The tomato roots used for the RNA-seq analysis were inoculated with V. dahliae 3ā€‰days before the analysis in both groups. Probabilityā€‰ā‰„ā€‰0.8 and expression-fold (TC/TM)ā€‰ā‰„ā€‰2 were examined as the threshold to determine the significance of gene expression differences between the two groups.
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