Table 2 Gene-specific nucleotide (nt) and amino acid (aa) sequence identities (%) and similarities (%) of the studied Hungarian avian orthoreoviruses to other avian origin reoviruses (Muscovy duck reovirus strains: J18, D2044, D1546; Turkey reovirus strains: TARV-MN2, D1104, D1246, 19831 M; Partridge reovirus: D1007).
Strain | λA | λB | λC | μA | μB | μNS | σC | σA | σB | σNS |
|---|---|---|---|---|---|---|---|---|---|---|
NT | ||||||||||
Hungarian chicken | 81.5–98.8 | 78.8–99.8 | 71.1–99.8 | 77.5–99.7 | 62.7–99.8 | 79.4–99.9 | 52.9–100.0 | 80.9–99.8 | 83.1–99.7 | 78.8–100.0 |
T1781 | 81.7–95.1 | 79.9–90.3 | 71.1–93.9 | 80.3–86.2 | 65.3–93.7 | 79.9–98.0 | 43.8–58.5 | 81.4–98.0 | 83.1–98.6 | 80.6–99.3 |
AVS–B | 82.5–93.3 | 81.5–93.8 | 73.2–90.6 | 77.6–95.8 | 64.0–76.7 | 79.4–92.7 | 54.9–69.1 | 80.4–89.6 | 83.6–90.1 | 79.6–98.8 |
S1133 | 83.1–89.7 | 80.2–87.2 | 70.5–82.0 | 77.3–88.6 | 64.0–85.1 | 79.9–87.0 | 54.3–78.8 | 80.7–90.7 | 85.3–91.0 | 78.7–83.2 |
D1007 | 78.0–79.0 | 79.4–84.5 | 70.6–84.8 | 80.2–86.4 | 63.9–78.6 | 80.1–87.0 | 52.2–59.5 | 81.0–88.0 | 81.6–84.4 | 80.7–82.6 |
Turkey | 81.6–84.0 | 78.4–83.5 | 78.4–83.5 | 77.2–86.3 | 64.4–77.1 | 78.8–86.4 | 48.8–60.4 | 76.0–89.2 | 58.7–72.1 | 73.0–80.9 |
Muscovy duck | 76.3–78.8 | 72.0–76.6 | 72.0–76.6 | 70.4–74.4 | 60.5–77.3 | 70.7–72.3 | 26.8–39.6 | 75.6–78.0 | 60.7–65.9 | 78.5–81.2 |
AA | ||||||||||
Hungarian chicken | 96.5–99.0 | 96.0–100.0 | 83.0–100.0 | 92.9–99.9 | 71.3–99.7 | 90.1–100.0 | 46.2–100.0 | 96.7–100.0 | 94.2–100.0 | 90.1–100.0 |
T1781 | 97.0–99.3 | 96.7–98.3 | 83.3–98.2 | 93.6–97.3 | 72.6–98.6 | 91.2–98.9 | 51.4–72.4 | 96.9–99.7 | 94.2–99.4 | 90.7–99.4 |
AVS–B | 97.0–99.1 | 95.9–99.1 | 83.7–96.8 | 93.6–96.6 | 71.1–90.2 | 90.2–96.7 | 50.5–75.5 | 96.4–97.9 | 95.5–97.1 | 90.7–100.0 |
S1133 | 97.0–98.0 | 95.9–96.9 | 83.7–93.8 | 93.4–98.7 | 72.5–95.0 | 91.3–93.8 | 46.7–81.9 | 95.6–96.7 | 95.5–97.7 | 92.1–94.2 |
D1007 | 95.1–95.6 | 94.8–96.0 | 81.7–91.8 | 92.2–95.8 | 72.4–94.2 | 89.3–95.6 | 49.5–55.2 | 96.4–98.7 | 87.7–90.6 | 91.8–93.0 |
Turkey | 96.2–97.1 | 94.5–95.9 | 81.1–90.9 | 91.7–95.4 | 71.3–90.2 | 88.8–92.1 | 50.0–55.7 | 95.4–97.2 | 77.1–80.3 | 90.1–92.1 |
Muscovy duck | 93.6–95.4 | 90.4–91.2 | 77.7–79.5 | 84.2–86.6 | 68.9–90.8 | 79.5–80.9 | 27.1–30.5 | 91.0–92.6 | 61.9–70.6 | 89.8–92.1 |
