Table 3

From: Lineage diversification, homo- and heterologous reassortment and recombination shape the evolution of chicken orthoreoviruses

 

NT

 

924-Bi-05

3457-M-11

16821-M-06

S1133

AVS-B

T1781

MRV-1

MRV-2

MRV-3

BroV

BRV

47/02

NBV

TVAV

Pycno-1

SSRV

AA

924-Bi-05

ID

95.3

98.0

66.2

65.6

65.3

47.5

45.5

46.3

49.5

45.6

52.8

61.6

64.4

64.5

64.0

3457-M-11

99.7

ID

95.5

63.9

63.9

64.3

46.3

44.1

45.6

47.8

44.3

51.6

59.6

62.3

62.6

62.5

16821-M-06

99.4

99.4

ID

65.8

65.8

65.1

47.2

45.3

46.4

49.3

46.1

52.9

61.2

64.5

64.6

64.1

S1133

72.6

72.8

72.5

ID

75.7

73.3

47.5

46.6

46.9

49.4

47.4

53.8

63.6

65.7

66.7

68.0

AVS-B

72.2

71.9

71.7

89.0

ID

71.9

47.7

46.7

46.7

50.8

47.2

54.3

63.6

65.7

66.7

68.0

T1781

73.4

73.3

73.1

85.7

88.5

ID

47.6

47.1

47.1

52.2

45.6

54.5

62.8

66.9

67.1

67.2

MRV-1

44.8

44.8

44.8

45.1

45.1

46.3

ID

74.7

82.9

44.9

42.0

47.0

46.7

47.5

47.9

48.4

MRV-2

44.9

44.9

44.9

45.6

45.7

46.8

97.8

ID

76.5

42.8

41.3

46.1

45.5

47.7

47.7

47.7

MRV-3

45.3

45.3

45.3

45.3

45.1

46.8

98.0

97.7

ID

44.1

41.0

45.8

45.4

46.6

47.8

47.3

BroV

45.7

45.7

45.6

47.4

47.4

48.2

40.9

40.6

41.1

ID

47.6

53.9

51.1

50.8

50.8

50.5

BRV

39.7

39.8

39.5

39.3

40.0

39.5

34.5

34.4

34.5

37.9

ID

50.2

46.5

47.4

47.7

47.1

47/02

51.0

50.9

50.9

51.2

52.9

53.2

42.6

42.8

42.8

49.0

40.1

ID

53.4

54.8

54.9

54.4

NBV

64.5

64.4

64.4

68.1

69.2

69.7

44.3

44.6

44.3

46.5

40.7

52.7

ID

65.5

65.6

66.1

TVAV

68.6

68.4

68.3

72.9

75.6

73.7

45.1

45.4

44.9

46.8

42.0

54.7

72.6

ID

70.8

71.9

Pycno-1

69.1

68.9

68.3

77.4

79.0

77.9

47.0

47.4

46.7

48.4

42.0

54.0

74.0

84.9

ID

75.8

SSRV

68.4

68.6

68.4

76.4

78.2

77.3

47.3

47.7

47.0

47.9

41.5

53.2

73.9

83.2

93.2

ID

  1. Nucleotide (nt) and amino acid (aa) sequence identities (%) and similarities (%) of the studied Hungarian avian orthoreoviruses (924-Bi-05, 3457-M-11, 16821-M-06) to representative strains of the five established Orthoreovirus species (Mammalian orthoreovirus, MRV: MRV-1 strain Lang, MRV-2 strain Jones, MRV-3 strain Dearing; Avian orthoreovirus: Avian orthoreovirus strain S1133; Nelson Bay orthoreovirus, NBV: Nelson Bay virus; Reptilian orthoreovirus: Bush viper reovirus strain 47/02; Baboon orthoreovirus: BRV: Baboon orthoreovirus), respectively, and strains, Broome virus (BRV), Steller sea lion reovirus (SSRV), Bulbul orthoreovirus (Pycno-1), and Tvärminne avian virus (TVAV) belonging to putative Orthoreovirus species.
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