Table 1 The gene expression and potential clinical application of 11 selected secreted genes.

From: SUMO-specific protease 3 is a key regulator for hepatic lipid metabolism in non-alcoholic fatty liver disease

Gene Symbol

OE_Gfold

OE_Log2fdc

OE_group1

KD_Gfold

KD_Log2fdc

KD_group2

Location

biomarker

Type

A2M

1.52154

1.64718

(12.9488)/(4.10322)

−4.26924

−4.79629

(0.151817)/(4.10322)

extracellular space

 

transporter

TNFRSF11B

1.54377

1.80015

(6.52981)/(1.85577)

−1.39613

−1.86165

(0.533395)/(1.85577)

plasma membrane

diagnosis

transmembrane receptor

APOE

1.14086

1.55592

(4.24542)/(1.42182)

−0.92172

−1.61638

(0.478918)/(1.42182)

extracellular space

diagnosis, progression

transporter

SEPP1

0.528556

0.768941

(4.82016)/(2.80529)

−1.7658

−2.19251

(0.641311)/(2.80529)

extracellular space

 

other

CASP9

0.452835

0.545562

(27.7131)/(18.8567)

−1.6161

−1.76155

(5.86863)/(18.8567)

cytoplasm

diagnosis

peptidase

FABP3

0.305249

0.37913

(88.3177)/(67.4482)

−1.61108

−1.72339

(21.5628)/(67.4482)

cytoplasm

diagnosis

transporter

F3

0.06848

0.142588

(36.7201)/(33.0407)

1.56437

1.62653

(107.78)/(33.0407)

plasma membrane

 

transmembrane receptor

SERPINE1

−0.21564

−0.3676

(5.48462)/(7.03013)

1.38929

1.50678

(21.1157)/(7.03013)

extracellular space

diagnosis, progression, prognosis

other

CD274

0

0.399799

(0.178413)/(0.132517)

1.91475

2.59352

(0.876092)/(0.132517)

plasma membrane

 

enzyme

ABCB1

0

−0.82259

(0.0369124)/(0.0675486)

−1.16348

−3.15243

(0.00427968)/(0.0675486)

plasma membrane

prognosis

transporter

INHBA

0

0.144985

(0.0889291)/(0.0781141)

1.8329

3.13707

(0.807319)/(0.0781141)

extracellular space

diagnosis

growth factor

  1. Group information: OE_group1 comprises SENP3-overexpressed hepatocytes following FFA treatment and mocked-gene-treated hepatocytes following FFA treatment. KD_group2 comprises SENP3-silenced hepatocytes following FFA treatment and mocked-gene-treated hepatocytes following FFA treatment. Gfold value with 0 means no statistical significance.