Table 1 Distribution of genome-wide gene transcription levels derived from the RNA-seq data.

From: Comparative transcriptome analysis between an evolved abscisic acid-overproducing mutant Botrytis cinerea TBC-A and its ancestral strain Botrytis cinerea TBC-6

Sample

TBC-A -17 h

TBC-A -41 h

TBC-A -48 h

TBC-A -52 h

TBC-A -72 h

TBC-A -96 h

TBC-A -120 h

TBC-6 -17 h

TBC-6 -41 h

TBC-6 -72 h

TBC-6 -96 h

TBC-6 -120 h

Number of highly expressed genes

1587

1548

1425

1531

1591

1542

1528

1622

1410

1231

1379

1095

Number of moderately expressed genes

4543

4877

4736

4674

4799

4869

4802

4943

4264

4047

4237

4251

Number of lowly expressed genes

2362

2966

3022

2895

2762

2771

2756

2810

3215

3713

3282

3822

Number of not expressed genes

2782

1883

2091

2174

2122

2092

2188

1899

2385

2283

2376

2106

Total number of expressed genes

8492

9391

9183

9100

9152

9182

9086

9375

8889

8991

8898

9168

Expressed genes %

75.32

83.30

81.45

80.72

81.18

81.44

80.59

83.16

78.85

79.75

78.92

81.32

  1. All genes are devided into four categories according to their RPKM values: genes not expressed (RPKM < 1), genes expressed at low levels (1 ≤ RPKM < 10), genes expressed at medium levels (10 ≤ RPKM < 100) and genes expressed at high levels (RPKM ≥ 100).
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