Table 3 The specific DRGs identified in T32 vs. T18.
TDa | MDDb | DRG Locus | DDTc | Sd | SALe | Description (TIGR) |
|---|---|---|---|---|---|---|
CG hypo-DRGs | −40.67 | BnaA03g39270D | 0 | + | NAf | NA |
−27.90 | BnaA09g46290D | −87 | − | AT1G13410 | Tetratricopeptide repeat (TPR)-like superfamily protein | |
−31.82 | BnaC01g25270D | 0 | − | NA | NA | |
−27.24 | BnaC01g33320D | 1906 | − | NA | NA | |
−25.69 | BnaC01g35440D | 0 | + | NA | NA | |
−25.95 | BnaC03g44230D | −1048 | + | AT2G04520 | Nucleic acid-binding, OB-fold-like protein | |
−25.89 | BnaC06g00730D | −1195 | + | NA | NA | |
−25.61 | BnaC07g12960D | 1789 | − | NA | NA | |
−28.44 | BnaC08g34040D | 0 | − | NA | NA | |
−29.39 | BnaA01g13320D | 478 | − | AT4G23640 | tiny root hair 1 (TRH1) | |
−26.97 | BnaA07g06910D | 1253 | − | AT1G31320 | lob domain-containing protein 4 (LBD4) | |
−26.57 | BnaA08g02650D | 411 | + | AT1G49480 | related to vernalization1 1 (RTV1) | |
−29.10 | BnaA08g02660D | 724 | − | AT1G49475 | AP2/B3-like transcriptional factor family protein | |
−34.68 | BnaA08g05750D | 1395 | + | AT4G15660 | thioredoxin superfamily protein | |
−36.21 | BnaC04g33690D | −1177 | + | AT2G21170 | triosephosphate isomerase (TIM) | |
−36.54 | BnaC07g08220D | 310 | − | AT4G14360 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | |
CG hyper-DRGs | 34.20 | BnaA03g49000D | 183 | + | NA | NA |
35.27 | BnaA03g39020D | 377 | + | AT2G16365 | F-box family protein | |
46.27 | BnaA05g10770D | 626 | + | AT2G32280 | vasculature complexity and connectivity (VCC) | |
26.27 | BnaA05g16350D | −1480 | + | AT1G32180 | cellulose synthase-like d6 (CSLD6) | |
28.30 | BnaA07g12210D | 1222 | − | AT5G66985 | unknown protein | |
40.63 | BnaA09g20620D | −342 | − | AT4G04020 | plastoglobulin 35 (PGL35) | |
29.73 | BnaC01g08880D | 0 | − | AT4G29660 | embryo defective 2752 (EMB2752) | |
26.54 | BnaC03g25860D | 0 | + | AT2G46530 | auxin response factor 11 (ARF11) | |
38.37 | BnaC04g03320D | −1631 | − | AT2G44090 | ankyrin repeat family protein | |
50.37 | BnaC04g39580D | −1581 | + | AT2G28190 | copper/zinc superoxide dismutase 2 (CSD2) | |
33.33 | BnaC05g08160D | 420 | − | AT1G10650 | SBP (S-ribonuclease binding protein) family protein | |
26.85 | BnaC06g24840D | −845 | − | AT1G70180 | Sterile alpha motif (SAM) domain-containing protein | |
32.29 | BnaC07g08840D | 1196 | + | AT1G30550 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | |
CHG hypo-DRGs | −32.48 | BnaA06g19130D | −1177 | − | AT4G12730 | FASCICLIN-like arabinogalactan 2 (FLA2) |
−33.36 | BnaC01g20920D | −467 | − | NA | NA | |
−43.07 | BnaC03g04740D | 879 | + | NA | NA | |
−28.40 | BnaC08g28690D | 0 | − | NA | NA | |
−26.83 | BnaC01g19320D | −1456 | + | AT4G27170 | seed storage albumin 4 (SESA4) | |
−25.67 | BnaC01g21110D | −1848 | + | AT4G17230 | scarecrow-like 13 (SCL13) | |
−42.05 | BnaC02g29760D | 1635 | + | AT5G42150 | glutathione S-transferase (GST) family protein | |
−26.87 | BnaC03g01150D | 1557 | + | AT5G03330 | cysteine proteinases superfamily protein | |
−27.27 | BnaC03g23710D | −1234 | − | AT2G42380 | BZIP transcription factor 34 (BZIP34) | |
−30.15 | BnaC03g42260D | −1429 | + | AT3G21700 | Arabidopsis thaliana G protein (AtSGP2) | |
−34.65 | BnaC03g65030D | −428 | − | AT4G22570 | adenine phosphoribosyl transferase 3 (APT3) | |
−35.83 | BnaC06g12760D | −505 | + | AT5G39990 | beta-glucuronosyltransferase 14a (GLCAT14A) | |
−25 | BnaC07g42330D | 0 | − | AT4G30080 | auxin response factor 16 (ARF16) | |
−28.69 | BnaC09g29070D | −1151 | + | AT5G53030 | unknown protein | |
CHG hyper-DRGs | 25.59 | BnaA09g10660D | 14 | − | NA | NA |
43.44 | BnaA01g13520D | −1153 | + | AT4G23900 | nucleoside diphosphate kinase family protein | |
40.28 | BnaA04g17380D | −1063 | − | AT2G30210 | laccase 3 (LAc4) | |
26.05 | BnaA08g15210D | −115 | − | AT4G36350 | purple acid phosphatase 25 (PAP25) | |
27.29 | BnaC02g00380D | −284 | + | AT5G65360 | histone 3.1 (H3.1) | |
29.43 | BnaC03g19880D | −1382 | − | AT2G36020 | hva22-like protein j (HVA22J) | |
32.60 | BnaC05g39140D | −1220 | − | AT3G14450 | ctc-interacting domain 9 (CID9) | |
CHH hypo-DRGs | −25.65 | BnaA09g32770D | −873 | + | AT3G52300 | “ATP synthase d chain, mitochondrial” (ATPQ) |
−25.15 | BnaC01g04970D | −1207 | + | AT4G33210 | slow motion (SLOMO) | |
−28.54 | BnaC06g04480D | −490 | + | AT1G51210 | UDP-Glycosyltransferase superfamily protein | |
CHH hyper-DRGs | 25.05 | BnaC02g26820D | −329 | − | NA | NA |
31.20 | BnaC01g10210D | 903 | + | AT4G17615 | calcineurin b-like protein 1 (CBL1) | |
37.82 | BnaC05g05560D | 719 | + | AT1G07900 | lob domain-containing protein 1 (LBD1) | |
26.88 | BnaC05g39760D | −1671 | + | AT3G13560 | O-Glycosyl hydrolases family 17 protein | |
27.14 | BnaC09g32910D | 0 | − | AT5G57320 | villin 5 (VLN5) |
