Table 1 List (with details) of top 20 known miRNAs and three potential-new miRNA and seven potential-candidate miRNAs that were detected in hAMSCs-CM derived exosomes.

From: Human adipose mesenchymal stem cell-derived exosomal-miRNAs are critical factors for inducing anti-proliferation signalling to A2780 and SKOV-3 ovarian cancer cells

Known miRNA

miRNA

Precursor

Sequence

Precursor Description

miRBase

ENTREZGENE

Sample 1

Sample 2

Sample 3

hsa-miR-4792

hsa-mir-4792

cggugagcgcucgcuggc

Homo sapiens miR-4792 stem-loop

miRBase:hsa-miR-4792

ENTREZGENE:100616448

361010

381745

381918

hsa-miR-320b

hsa-mir-320b-1,hsa-mir-320b-2

aaaagcuggguugagagggcaa

Homo sapiens miR-320b-1 stem-loop,Homo sapiens miR-320b-2 stem-loop

miRBase:hsa-miR-320b

ENTREZGENE: 100313823

2628

2094

2046

hsa-miR-320a

hsa-mir-320a

aaaagcuggguugagagggcga

Homo sapiens miR-320a stem-loop

miRBase:hsa-miR-320a

ENTREZGENE: 407037

1645

1311

1293

hsa-miR-7704

hsa-mir-7704

cggggucggcggcgacgug

Homo sapiens miR-7704 stem-loop

miRBase:hsa-miR-7704

 

1470

971

1145

hsa-miR-127-3p

hsa-mir-127

ucggauccgucugagcuuggcu

Homo sapiens miR-127 stem-loop

miRBase:hsa-miR-127-3p

ENTREZGENE: 406914

943

836

807

hsa-miR-6087

hsa-mir-6087

ugaggcgggggggcgagc

Homo sapiens miR-6087 stem-loop

miRBase:hsa-miR-6087

 

783

831

885

hsa-miR-22-3p

hsa-mir-22

aagcugccaguugaagaacugu

Homo sapiens miR-22 stem-loop

miRBase:hsa-miR-22-3p

ENTREZGENE:407004

772

638

671

hsa-miR-4466

hsa-mir-4466

gggugcgggccggcgggg

Homo sapiens miR-4466 stem-loop

miRBase:hsa-miR-4466

ENTREZGENE:100616154

459

541

618

hsa-miR-486-5p

hsa-mir-486-1,hsa-mir-486-2

uccuguacugagcugccccgag

Homo sapiens miR-486 stem-loop,Homo sapiens miR-486-2 stem-loop

miRBase:hsa-miR-486-5p

ENTREZGENE:619554

581

529

453

hsa-miR-4532

hsa-mir-4532

ccccggggagcccggcg

Homo sapiens miR-4532 stem-loop

miRBase:hsa-miR-4532

ENTREZGENE:100616353

449

449

625

hsa-miR-7641

hsa-mir-7641-1,hsa-mir-7641-2

uugaucucggaagcuaagc

Homo sapiens miR-7641-1 stem-loop,Homo sapiens miR-7641-2 stem-loop

miRBase:hsa-miR-7641

 

518

490

428

hsa-miR-423-5p

hsa-mir-423

ugaggggcagagagcgagacuuu

Homo sapiens miR-423 stem-loop

miRBase:hsa-miR-423-5p

ENTREZGENE:494335

328

273

273

hsa-miR-181a-5p

hsa-mir-181a-1,hsa-mir-181a-2

aacauucaacgcugucggugagu

Homo sapiens miR-181a-1 stem-loop,Homo sapiens miR-181a-2 stem-loop

miRBase:hsa-miR-181a-5p

ENTREZGENE:406954

226

224

130

hsa-miR-4448

hsa-mir-4448

ggcuccuuggucuaggggua

Homo sapiens miR-4448 stem-loop

miRBase:hsa-miR-4448

ENTREZGENE:100616127

232

144

137

hsa-miR-423-3p

hsa-mir-423

agcucggucugaggccccucagu

Homo sapiens miR-423 stem-loop

miRBase:hsa-miR-423-3p

ENTREZGENE:494335

195

143

155

hsa-miR-3960

hsa-mir-3960

ggcggcggcggaggcggggg

Homo sapiens miR-3960 stem-loop

miRBase:hsa-miR-3960

ENTREZGENE:100616250

134

105

148

hsa-miR-1246

hsa-mir-1246

aauggauuuuuggagcagg

Homo sapiens miR-1246 stem-loop

miRBase:hsa-miR-1246

ENTREZGENE:100302142

122

104

128

hsa-miR-26a-5p

hsa-mir-26a-1,hsa-mir-26a-2

uucaaguaauccaggauaggcu

Homo sapiens miR-26a-1 stem-loop,Homo sapiens miR-26a-2 stem-loop

miRBase:hsa-miR-26a-5p

ENTREZGENE:407015

146

110

74

hsa-miR-378a-3p

hsa-mir-378a

acuggacuuggagucagaaggc

Homo sapiens miR-378a stem-loop

miRBase:hsa-miR-378a-3p

ENTREZGENE:494327

93

113

96

hsa-miR-3687

hsa-mir-3687-1,hsa-mir-3687-2

cccggacaggcguucgugcgacgu

Homo sapiens miR-3687-1 stem-loop,Homo sapiens miR-3687-2 stem-loop

miRBase:hsa-miR-3687

ENTREZGENE:100500815

104

70

84

Potential New-miRNAs

Probitional miRNA_Id

Mature Sequence

Precursor Sequence

Mature Length (nt)

Chr No.

Start

End

Precursor Length(nt)

chr12:109181601-109181645

agaggaggagaagaaacu

uaacuuuuccccuacucuugccauagagaggaggagaagaaacu

18

chr12

109181601

109181645

45

chr7:148638583-148638650

ccccacaaccgcgcuugacu

gguccgaguguuguggguuauuguuaaguugauuuaacauugucuccccccacaaccgcgcuugacu

20

chr7

148638583

148638650

68

Chr16:73092094-73092157

ggcggcggcggcggcggc

ggcggcggcggcgcggggccggggaggagggggcggcccgggcucggcggcggcggcggcggc

18

Chr16

73092094

73092157

64

Expected Candidate-miRNAs

chr8:56821963-56822004

gugggauuaugacugaac

gugggauuaugacugaacauguccaagucagaaucccacuc

18

chr8

56821963

56822004

42

chr6:28678365-28678429

ggggguguagcucaguggu

ggggguguagcucagugguagagcgcgugcuuagcaugcacgaggcccuggguucaauccccag

19

chr6

28678365

28678429

65

chr6:28726148-28726212

ggggguguagcucaguggu

ggggguguagcucagugguagagcacaugcuuugcaugugugaggccccggguucgauccccgg

19

chr6

28726148

28726212

65

chr20:36065457-36065499

gagaguuugauccuggcuc

guggggguggggguaggaggauggagaguuugauccuggcuc

19

chr20

36065457

36065499

43

chr20:61801606-61801662

gcauccuggggcuggaga

gcauccuggggcuggagagguugaggcugccaccccuccagaccagagggaugugg

18

chr20

61801606

61801662

57

chrY:10035763-10035818

agaggugaaauucuuggac

aagagggauggcugggggcauucguauugugccacuagaggugaaauucuuggac

19

chrY

10035763

10035868

106

chr11:122928783-122928833

cuuccuuggaugucugagugac

caccagaauucaagguguuggcaacuaccuuccuuggaugucugagugac

22

chr11

122928783

122928833

51