Table 2 Conditional gene essentiality predictions using six metabolic models from three Pseudomonas species.

From: Comparison of 432 Pseudomonas strains through integration of genomic, functional, metabolic and expression data

Organism

P. aeruginosa

P. putida

P. fluorescens

Model

iMO1056

iMO1086

iJN746

iJP815

iJP962

iSB1139

Medium sources

 #Carbon

49

51

60

40

43

44

 #Nitrogen

32

33

22

25

27

19

 #Sulfur

4

1

10

1

1

6

 #Phosphor

2

2

1

1

1

2

Genes

 #Essential/persistent*

115/106

149/132

118/104

112/100

162/148

117/95

 #Conditional/persistent*

591/278

601/278

389/170

113/64

495/252

615/290

 #Non-essential

348

336

253

593

305

407

 #Overlapping genes

95

68

 
  1. *Persistence was computed for each essential and conditional essential genes over the 58 Pseudomonas genomes.
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