Table 1 The hubs in pan-network and core-networka.

From: Pan- and core- network analysis of co-expression genes in a model plant

 

Degree

Gene description

AT1G33040

1524

nascent polypeptide-associated complex subunit alpha-like

AT2G37660

1527

NAD(P)-binding Rossmann-fold superfamily protein

AT1G15820

1529

light harvesting complex photosystem II subunit 6

AT3G49680

1549

branched-chain aminotransferase 3

AT5G46110

1551

Glucose-6-phosphate/phosphate translocator-related

AT1G55490

1605

chaperonin 60 beta

AT1G74470

1607

Pyridine nucleotide-disulphide oxidoreductase family protein

AT3G56940

1615

dicarboxylate diiron protein, putative (Crd1)

AT4G01150

1642

located in thylakoid

AT1G10960

1648

ferredoxin 1

Top 10 hubs in core-network

AT2G46820

86

photosystem I P subunit

AT3G60770

86

Ribosomal protein S13/S15

AT4G03280

86

photosynthetic electron transfer C

AT4G21280

86

photosystem II subunit QA

AT2G36170

88

Ubiquitin supergroup; Ribosomal protein L40e

AT1G42970

89

glyceraldehyde-3-phosphate dehydrogenase B subunit

AT5G16130

90

Ribosomal protein S7e family protein

AT1G26880

98

Ribosomal protein L34e superfamily protein

AT1G54780

102

thylakoid lumen 18.3 kDa protein

AT3G23390

103

Zinc-binding ribosomal protein family protein

  1. aSee Supplemental File 2 for a full list of nodes.