Table 1 Characteristics of studies on association between CD44 single nucleotide polymorphisms and cancers.
From: Associations of five polymorphisms in the CD44 gene with cancer susceptibility in Asians
Single Nucleotide Polymorphisms | Author | Year | Ethnicity | Cancers | Genotyping Method | Quality Score | Cases | Controls | Source of Controls | P for HWE in controls | Cases | Controls | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AA | AB | BB | AA | AB | BB | |||||||||||
rs13347 | Yadava | 2015 | Indian | GBC | TaqMan, ARMS-PCR, PCR-RFLP | 9 | 610 | 250 | PB | 0.62 | 378 | 201 | 31 | 162 | 80 | 8 |
rs13347 | Wu | 2015 | Chinese | CRC | MALDI-TOF mass spectrometry | 9 | 946 | 989 | PB | 0.28 | 416 | 441 | 89 | 578 | 348 | 63 |
rs13347 | Weng | 2015 | Chinese | TCC | TaqMan | 8 | 275 | 275 | HB | 0.15 | 138 | 111 | 26 | 143 | 117 | 15 |
rs13347 | Liu | 2015 | Chinese | NSCLC | Taqman | 8 | 234 | 468 | HB | 0.82 | 179 | 51 | 4 | 337 | 121 | 10 |
rs13347 | Sharmaa | 2014 | Indian | GBC | TaqMan, PCR-RFLP | 9 | 405 | 200 | PB | 0.57 | 293 | 104 | 8 | 154 | 42 | 4 |
rs13347 | Lou | 2014 | Chinese | NPC | ABI 3730xl sequencing platform | 8 | 287 | 507 | HB | 0.91 | 104 | 126 | 42 | 288 | 174 | 27 |
rs13347 | Chou-1b | 2014 | Chinese | OSCC | TaqMan | 7 | 599 | 561 | HB | 0.92 | 287 | 262 | 50 | 295 | 223 | 43 |
rs13347 | Chou-2b | 2014 | Chinese | HCC | TaqMan | 7 | 203 | 561 | HB | 0.92 | 110 | 72 | 21 | 295 | 223 | 43 |
rs13347 | Xiao | 2013 | Chinese | NPC | MALDI-TOF mass spectrometry | 9 | 906 | 943 | PB | 0.64 | 386 | 418 | 102 | 606 | 297 | 40 |
rs13347 | Wu | 2013 | Chinese | AML | MALDI-TOF mass spectrometry | 9 | 421 | 461 | PB | 0.34 | 163 | 196 | 62 | 254 | 171 | 36 |
rs13347 | Tulsyan | 2013 | Indian | BC | ABI 7500 Real Time PCR system | 8 | 258 | 241 | HB | 0.58 | 191 | 60 | 7 | 178 | 57 | 6 |
rs13347 | Jiang | 2012 | Chinese | BC | MALDI-TOF mass spectrometry | 9 | 1049 | 1157 | PB | 0.84 | 451 | 484 | 114 | 654 | 430 | 73 |
rs11821102 | Wu | 2015 | Chinese | CRC | MALDI-TOF mass spectrometry | 9 | 946 | 989 | PB | <0.001 | 815 | 119 | 12 | 843 | 131 | 15 |
rs11821102 | Weng | 2015 | Chinese | TCC | TaqMan | 8 | 275 | 275 | HB | 0.92 | 234 | 39 | 2 | 222 | 50 | 3 |
rs11821102 | Lou | 2014 | Chinese | NPC | ABI 3730xl sequencing platform | 8 | 287 | 507 | HB | 0.35 | 252 | 27 | 1 | 439 | 54 | 3 |
rs11821102 | Chou-1b | 2014 | Chinese | OSCC | TaqMan | 7 | 599 | 561 | HB | 0.28 | 531 | 63 | 5 | 481 | 75 | 5 |
rs11821102 | Chou-2b | 2014 | Chinese | HCC | TaqMan | 7 | 203 | 561 | HB | 0.28 | 173 | 29 | 1 | 481 | 75 | 5 |
rs11821102 | Xiao | 2013 | Chinese | NPC | MALDI-TOF mass spectrometry | 9 | 906 | 943 | PB | 0.14 | 796 | 100 | 10 | 805 | 129 | 9 |
rs11821102 | Wu | 2013 | Chinese | AML | MALDI-TOF mass spectrometry | 9 | 421 | 461 | PB | 0.28 | 370 | 50 | 1 | 398 | 59 | 4 |
rs11821102 | Jiang | 2012 | Chinese | BC | MALDI-TOF mass spectrometry | 9 | 1049 | 1157 | PB | 0.22 | 912 | 125 | 12 | 997 | 151 | 9 |
rs10836347 | Wu | 2015 | Chinese | CRC | MALDI-TOF mass spectrometry | 9 | 946 | 989 | PB | 0.10 | 821 | 120 | 5 | 851 | 129 | 9 |
rs10836347 | Lou | 2014 | Chinese | NPC | ABI 3730xl sequencing platform | 8 | 287 | 507 | HB | 0.85 | 249 | 27 | 2 | 438 | 55 | 2 |
rs10836347 | Chou-1b | 2014 | Chinese | OSCC | TaqMan | 7 | 599 | 561 | HB | 0.15 | 522 | 73 | 4 | 487 | 69 | 5 |
rs10836347 | Chou-2b | 2014 | Chinese | HCC | TaqMan | 7 | 203 | 561 | HB | 0.15 | 180 | 23 | 0 | 487 | 69 | 5 |
rs10836347 | Xiao | 2013 | Chinese | NPC | MALDI-TOF mass spectrometry | 9 | 906 | 943 | PB | 0.31 | 785 | 118 | 3 | 792 | 147 | 4 |
rs10836347 | Wu | 2013 | Chinese | AML | MALDI-TOF mass spectrometry | 9 | 421 | 461 | PB | 0.93 | 364 | 55 | 2 | 404 | 55 | 2 |
rs10836347 | Jiang | 2012 | Chinese | BC | MALDI-TOF mass spectrometry | 9 | 1049 | 1157 | PB | 0.97 | 906 | 139 | 4 | 995 | 156 | 6 |
rs713330 | Weng | 2015 | Chinese | TCC | TaqMan | 8 | 275 | 275 | HB | 0.87 | 231 | 42 | 2 | 223 | 49 | 3 |
rs713330 | Chou-1b | 2014 | Chinese | OSCC | TaqMan | 7 | 599 | 561 | HB | 0.09 | 507 | 88 | 4 | 467 | 86 | 8 |
rs713330 | Chou-2b | 2014 | Chinese | HCC | TaqMan | 7 | 203 | 561 | HB | 0.09 | 167 | 36 | 0 | 467 | 86 | 8 |
rs713330 | Xiao | 2013 | Chinese | NPC | MALDI-TOF mass spectrometry | 9 | 906 | 943 | PB | 0.74 | 732 | 164 | 10 | 751 | 180 | 12 |
rs713330 | Wu | 2013 | Chinese | AML | MALDI-TOF mass spectrometry | 9 | 421 | 461 | PB | 0.39 | 341 | 74 | 6 | 371 | 87 | 3 |
rs713330 | Jiang | 2012 | Chinese | BC | MALDI-TOF mass spectrometry | 9 | 1049 | 1157 | PB | 0.39 | 865 | 172 | 12 | 950 | 194 | 13 |
rs1425802 | Weng | 2015 | Chinese | TCC | TaqMan | 8 | 275 | 275 | HB | 0.001 | 105 | 121 | 49 | 99 | 109 | 67 |
rs1425802 | Chou-1b | 2014 | Chinese | OSCC | TaqMan | 7 | 599 | 561 | HB | < 0.001 | 197 | 249 | 153 | 194 | 235 | 132 |
rs1425802 | Chou-2b | 2014 | Chinese | HCC | TaqMan | 7 | 203 | 561 | HB | < 0.001 | 70 | 75 | 58 | 194 | 235 | 132 |
rs1425802 | Xiao | 2013 | Chinese | NPC | MALDI-TOF mass spectrometry | 9 | 906 | 943 | PB | 0.11 | 270 | 450 | 186 | 299 | 442 | 202 |
rs1425802 | Wu | 2013 | Chinese | AML | MALDI-TOF mass spectrometry | 9 | 421 | 461 | PB | 0.08 | 126 | 204 | 91 | 122 | 248 | 91 |
rs1425802 | Jiang | 2012 | Chinese | BC | MALDI-TOF mass spectrometry | 9 | 1049 | 1157 | PB | 0.55 | 316 | 513 | 220 | 353 | 563 | 241 |