Table 1 Statistic of SLAF sequencing data and high-quality marker depths.

From: A second generation SNP and SSR integrated linkage map and QTL mapping for the Chinese mitten crab Eriocheir sinensis

Sample

Raw reads (bp)

Q30 percentage (%)

GC percentage (%)

SLAF number

Total reads number

Average depth

Female parent

6,855,402

87.13

44.39

194,887

5,771,500

29.61×

Male parent

7,192,892

86.32

44.48

200,452

6,360,679

31.73×

Average in progeny

745,247

86.39

44.43

107,758

345,020

3.15×

Total

123,599,603

85.82

44.43

235,619

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