Table 3 Summary of the catfish 690 K SNP array.
SNP array | Number |
|---|---|
Number of genic SNPs | 238,484 |
Number of intergenic SNPs | 452,178 |
Number of SNPs tiled with single probe | 687,757 |
Number of SNPs tiled with two probes | 2,905 |
Channel catfish-specific SNPs | 581,002 |
Blue catfish-specific SNPs | 44,694 |
Inter-species SNPs | 19,124 |
Channel-blue both possessed | 45,842 |
Strain-specific SNPs | 48,434 |
Domesticate strain (Thompson) | 12,672 |
Domesticate strain (Hatchery) | 9,498 |
Domesticate strain (Marion) | 10,309 |
Domesticate strain (USDA 103) | 9,333 |
Wild population | 6,622 |
Total number of SNPs on array | 690,662 |
