Table 1 Genome features of C. cucurbitarum.
Assembly statistics | |
|---|---|
Total contig length (Mbp) | 28.89 |
Total scaffold length (Mbp) | 29.10 |
Average base coverage (fold) | 86.2 |
Number of scaffolds | 2,814 |
N50 contig length (kbp) | 24.2 |
N50 scaffold length (kbp) | 27.9 |
G + C content (overall) (%) | 37.41 |
G + C content (coding region) (%) | 41.65 |
G + C content (non-coding region) (%) | 34.38 |
Predicted protein-coding genes | |
Predicted genes | 11,977 |
Percent coding (%) | 49.17 |
Average coding sequence size (nt) | 1,194 |
Gene density (genes/Mb) | 411.62 |
Total exons | 47,510 |
Total introns | 35,533 |
Number of introns per gene (median) | 3 |
Number of exons per gene (median) | 3 |
Average exon length (nt) | 301.16 |
Average intron length (nt) | 71.39 |
