Table 2 Comparison of Drug Resistant Gene Mutation Detection in Clinical Isolates by Sanger Sequencing and MALDI-TOF MS.
Sample ID | MALDI-TOF MS | Drug Susceptibility Test | Sanger Sequencing | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
rpoB | katG | embB | gyrA | gyrB | rpsL | inhA | pncA | Result | RIF | INH | Mutation for RIF | Mutation for INH | |
MTB-01 | 533 | 315 | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon 533 CTG/CCG | katG codon 315 AGC/AAC |
MTB-02 | 531 |  | 497 |  |  | 43 | −15 |  | MDR | R | R | rpoB codon 531 TCG/TTG | inhAr -15 C/T |
MTB-03 | 531 | 315 | Â | Â | Â | 43 | Â | Â | MDR | R | R | rpoB codon 531 TCG/TTG | katG codon 315 AGC/AAC |
MTB-04 | 522 |  | 306 |  |  |  | −15 |  | MDR | R | R | rpoB codon 522 TCG/TTG | inhAr -15 C/T |
MTB-05 | 526 | Â | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon 526 CAC/TAC | Â |
MTB-06 | 526 | 315 | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon 526 CAC/TAC | Kat G codon 315 AGC/ACC |
MTB-07 | 513 | Â | 406 | Â | Â | 43 | Â | Â | MDR | R | R | rpoB codon 513 Q513P/L | Â |
MTB-08 | 531 | 315 |  |  |  |  | −15 |  | MDR | R | R | rpoB codon S531L | inhAr -15 C/T |
MTB-09 | 526 | 315 | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon H526D | katG codon 315 AGC/ACC |
MTB-10 | 526 | 315 | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon H526D | katG codon 315 AGC/ACC |
MTB-11 | 531 | Â | 306 | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon S531L | INH: WT |
MTB-12 | Â | Â | Â | Â | Â | Â | Â | Â | N | S | S | rpoB: WT | INH: WT |
MTB-13 | Â | 315 | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB: WT | katG codon 315 AGC/ACC |
MTB-14 | Â | 315 | Â | Â | Â | Â | Â | Â | N | S | R | rpoB: WT | katG codon 315 AGC/ACC |
MTB-15 | Â | 315 | Â | Â | Â | Â | Â | Â | N | S | R | rpoB: WT | katG codon 315 AGC/ACC |
MTB-16 | 516 | Â | 497 | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon D516V | Â |
MTB-17 | 531 | 315 | 306 |  |  |  | −15 |  | MDR | R | R | rpoB codon S531L | inhAr -15 C/T |
MTB-18 | 531 | Â | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon S531L | Â |
MTB-19 | 531 | 315 | Â | Â | Â | Â | Â | Â | MDR | R | R | rpoB codon S531L | katG codon 315 AGC/ACC |
MTB-20 | Â | Â | Â | Â | Â | Â | Â | Â | N | S | S | rpoB: WT | ND |