Table 1 Primers used in this study.
From: A de novo deletion mutation in SOX10 in a Chinese family with Waardenburg syndrome type 4
Primer name | Sequence |
|---|---|
SOX10 E1F (765 bp) | AGATGGGTTTAGCTGGAGCA |
SOX10 E1R (765 bp) | ACCTGGTCTTCCAGCCCTAT |
SOX10 E2F (686 bp) | GTTATTCCTTGGGCCTCACA |
SOX10 E2R (686 bp) | CTTTGCCCAGTAGGATCAGC |
SOX10 E3A F (686 bp) | GCTGCCAAAATGTGAAACTTA |
SOX10 E3A R (686 bp) | GAGTGGCCATAATAGGGTCC |
SOX10 E3BF (561 bp) | AGCCCAGGTGAAGACAGAGA |
SOX10 E3BR (561 bp) | TCTGTCCAGCCTGTTCTCCT |
EDN3 E1 F (407 bp) | CAGAAGCCAGAAAAGCCCGA |
EDN3 E1 R (407 bp) | CCAGGCAAGAGTTTGCTCCC |
EDN3 E2 F (597 bp) | TTTGCAGACATTTTGCTTGC |
EDN3 E2 R (597 bp) | CCTGACCTGCAGAAGAGACC |
EDN3 E3 F (480 bp) | GGTGCACAGTTCACTCCAGA |
EDN3 E3 R (480 bp) | CCCACAGGACGACAGTAGGT |
EDN3 E4 F (607 bp) | CGTCTGTGAAACCCAGTGTG |
EDN3 E4 R (607 bp) | CATCACTGCCCAGAGCTACA |
EDN3 E5 F (424 bp) | GGCTCGGAAATTGCTGAGAAG |
EDN3 E5 R (424 bp) | TCTTTGGGTGGGTGTTCTGC |
EDNRB E1 F(748 bp) | CTTTTGAGCGTGGATACTGG |
EDNRB E1 R(748 bp) | AGGGAGCTAAAGGGAAGCTC |
EDNRB E2 F (498 bp) | AACACACTTTCCTGTCCCATAC |
EDNRB E2 R (498 bp) | TTCTACTGCTGTCCATTTTGG |
EDNRB E3 F (555 bp) | CTGTGGGAATCACTGTGCTG |
EDNRB E3 R (555 bp) | AGCTTGAGTCATTGATCACCA |
EDNRB E4 F (432 bp) | TGTTCAGTAAGTGTGGCCTGA |
EDNRB E4 R (432 bp) | CAAGAAAAAGGAAATATGCTCTGG |
EDNRB E5 F (466 bp) | CACTTCGGTTCCACTTCACA |
EDNRB E5 R (466 bp) | CTTCCCTGTCCCTCTCAACA |
EDNRB E6 F (493 bp) | GAGGGGGACACAGACAGAGA |
EDNRB E6 R (493 bp) | GCAGTAGGGAGTGGCTGACT |
EDNRB E7 F (466 bp) | AAGAGGGAAAATAAAAGAGCACTG |
EDNRB E7 R (466 bp) | TTCTTTCCATGCCGTAAACA |
PAX3 E1F (620 bp) | GAACATTTGCCCAGACTCGT |
PAX3 E1R (620 bp) | TCCAAAACAACAGGGACAAGT |
PAX3-2F (503 bp) | CCGATGTCGAGCAGTTTCAG |
PAX3-2R (503 bp) | CGCACCTTCACAAACCTCAG |
PAX3-3F (420 bp) | TGGGATGTGTTCTGGTCTG |
PAX3-3R (420 bp) | TCCCAATAGCTGAGATCGA |
PAX3-4F (383 bp) | CTGGAGAAGGATGAGGATGT |
PAX3-4R (383 bp) | CGTCAGATCACCAATGTCAG |
PAX3-5F (508 bp) | TACGGATTGGTTAGACTTGT |
PAX3-5R (508 bp) | AACAATATGCATCCCTAGTAA |
PAX3-6F (445 bp) | CAACACAGAAGGCAGAGA |
PAX3-6R (445 bp) | ATAGGTACGTTCAGGACAA |
PAX3-7F (586 bp) | TGTGCAGAGATAGGTGTGAC |
PAX3-7R (586 bp) | TTTGATGAAGCCAGTAGGA |
PAX3 E8F (543 bp) | GTTATTCTTTCAGCTGTAGGC |
PAX3 E8R (543 bp) | GTCTCAACAATTAATAACCGC |
MITF E1F (630 bp) | GGAGTTGCACTAGCGGTGTC |
MITF E1R (630 bp) | GCTCCATCCGAGCTTCCTA |
MITF E2F (628 bp) | GCCTGATAAAAATGCCTTGA |
MITF E2R (628 bp) | AGCCACGTAAGAATTAAGGGA |
MITF E3F (564 bp) | GCACAGTGCCTGGTACATAAC |
MITF E3R (564 bp) | TGCTCTACACCCAATAACCC |
MITF E4 F (310 bp) | TCATCTTTTGGTCAGATTCCAC |
MITF E4 R (310 bp) | TGCTTAAGTTTTCAGGAAGGTG |
MITF-5F (343 bp) | GACCATTATTGCTTTGGGTAAAA |
MITF-5R (343 bp) | TGTGATCCTGAGATAATTCTCCATT |
MITF-6F (425 bp) | TGAGGAGATCCTGTACCTCTCTT |
MITF-6R (425 bp) | AAAAGTTACGTCCATGAGTTGG |
MITF-7F (350 bp) | GCTTTTGAAAACATGCAAGC |
MITF-7R (350 bp) | GCTGTAGGAATCAACTCTCCTCT |
MITF E8 F (527 bp) | AAGGGCTTTGGAAATGGTAA |
MITF E8 R (527 bp) | AGAAAGCCACCTCCTCACAA |
MITF-9F (425 bp) | CTTATCCATGTAACCAAGCA |
MITF-9R (425 bp) | CACACACACAGAATCCACAAA |
MITF-10F (646 bp) | CTAATGACGCGCATCTACCA |
MITF-10R (646 bp) | TCCTGGGCTATTGATAAAGCA |
SNAI2 E1 F (388 bp) | CGGGCTCAGTTCGTAAAGGA |
SNAI2 E1 R (388 bp) | GCTCCCTTTCAGGACACTGTTA |
SNAI2 E2 AF (534 bp) | GCCCTCCTAAATGGGTCTATC |
SNAI2 E2 AR (534 bp) | TTTTCTAGACTGGGCATCGC |
SNAI2 E2 BF (565 bp) | GCCCCATTAGTGATGAAGAG |
SNAI2 E2 BR (565 bp) | GATCTTTGAGACCAAACCTTC |
SNAI2 E3 F (556 bp) | GGTTTTGCTGCTTCTCATTAT |
SNAI2 E3 R (556 bp) | TCTCTCAATCTAGCCATCAGC |
D22S283 F (217 bp) | FAM-ACAAACACTTCTACAGTCCTGG |
D22S283 R (217 bp) | TGAGCCACGGAGATCTTTC |
D22S1177 F (186 bp) | FAM-GCCACTCTGGCACCAT |
D22S1177 R (186 bp) | AGCTGTNAGCAAGCAGG |
D22S1045 F (153 bp) | FAM-GCTAGATTTTCCCCGATGAT |
D22S1045 R (153 bp) | ATGTAAAGTGCTCTCAAGAGTGC |
D22S272 F (132 bp) | FAM-GAGTTTTGTTTGCCTGGCAC |
D22S272 R (132 bp) | AATGCACGACCCACCTAAAG |
D22S423 F (123 bp) | FAM-CACACTGGTACACACATACACA |
D22S423 R (123 bp) | AAACCAACTGACTCGTTTAGG |
rs139885 F (625 bp) | CACCCATGCCTACTGTCTTC |
rs139885 R (625 bp) | GAGACCCTGGACCACATACA |
rs3952 F (263 bp) | CTTGCTGTAGCCTTGGGAATA |
rs3952 R (263 bp) | GTAGAGGGAGGTGGCGAGA |
rs5756908 F (306 bp) | AGTTTCCCAAAGATACTGTCCC |
rs5756908 R (306 bp) | CCAGTTAGTCCCTCCTCCAA |
rs4821733 F (434 bp) | GCAGGCATTGGCATCACC |
rs4821733 R (434 bp) | AAATTGCTTGAATGCGGGAG |
rs139873 F (374 bp) | AAAAAGACTCCTGGCTTCCA |
rs139873 R (374 bp) | CCCACAGTGCTCGGATTC |
