Table 5 Distinctive loci and associated agronomic traits in the elite lines 01–20 and 01-07-258.

From: Genome-wide indel/SSR scanning reveals significant loci associated with excellent agronomic traits of a cabbage (Brassica oleracea) elite parental line ‘01–20’

Loci

Chromosome

Position

Associated traits

LOD

R2 (%)

Additive effect

Indel26

2

53.4

Lca* 2.1 (2012a)

4.6

8.5

0.4

Lcb* 2.1 (2012a)

5.98

12.3

−1.08

Indel488

2

54.7

—

—

—

—

scaffold29640

3

36.0

—

—

—

—

Indel64

3

37.3

Pd 3.2 (2012a)

12.76

19.6

3.42

Pd 3.2 (2012s)

10.04

21.2

2.97

Ll 3.1 (2012a)

8.74

14.9

1.88

Ll 3.1 (2011a)

3.13

6.4

1.29

Lw 3.2 (2011a)

5.03

12.7

1.48

Pl 3.1 (2012a)

5.93

9.6

1.12

Pw 3.1 (2012a)

4.4

7

0.11

Hs 3.1 (2012a)

4.92

8.7

−0.04

Indel139

5

106.0

—

—

 

—

Indel612

8

79.7

LcL 8.1 (2011a)

11.64

26.1

−1.04

Indel235

8

84.7

LcL 8.1 (2012s)

5.23

13.9

−0.81

HcL 8.1 (2012a)

3.03

6

−0.62

Pt 8.1 (2011a)

4.64

11.3

2.01

Indel353

9

58.6

Lca* 9.2 (2011a)

4.09

9.5

0.35

Lca* 9.2 (2012s)

4.49

8

−0.34

Lcb* 9.1 (2011a)

4.75

9.4

−0.94

Lcb* 9.2 (2012s)

4.03

9.5

−0.57

Lcb* 9.2 (2012a)

4.14

8

−0.67

Hsi 9.1 (2012s)

3.96

9.6

0.03

Cw/Htd 9.1 (2012s)

6.34

13.2

0.01

Dmc 9.1 (2012s)

4.4

10.1

0.22

Cfc 9.1 (2012s)

6.48

13.9

0.03

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