Table 1 Nucleotide composition of mitochondrial genomes within Longidoridae.
From: Mitochondrial genome diversity in dagger and needle nematodes (Nematoda: Longidoridae)
Nucleotide | Xiphinema americanum (NC_0055928) | Xiphinema pachtaicum (KU746821) | Xiphinema rivesi (KU746820) | Longidorus vineacola (KU746818) | Paralongidorus litoralis (KU746819) |
|---|---|---|---|---|---|
Length (bp) | |||||
Entire Sequence | 12,626 | 12,489 | 12,624 | 13,519 | 12,763 |
Protein coding sequence | 10,014 | 9,921 | 10,116 | 10,099 | 10,002 |
Ribosomal RNA gene sequence | 1,298 | 1,238 | 1,295 | 1,272 | 1,326 |
Transfer RNA gene sequence | 1,012 | 1,051 | 1,111 | 1,214 | 1,159 |
Non coding region | 166 | 397 | 161 | 973 | 371 |
A + T (%) | |||||
Entire Sequence | 66.50 | 68.50 | 68.86 | 63.64 | 63.89 |
Protein coding sequence | 66.67 | 68.45 | 69.41 | 63.53 | 63.89 |
Codon position | |||||
1st codon | 64.15 | 65.59 | 65.77 | 59.64 | 60.54 |
2nd codon | 64.44 | 65.35 | 64.97 | 61.54 | 63.23 |
3rd codon | 71.14 | 74.30 | 77.26 | 69.11 | 67.61 |
