Table 6 Transcription factors differentially expressing under drought and salt stresses.

From: Combined analysis of mRNA and miRNA identifies dehydration and salinity responsive key molecular players in citrus roots

Genes

Full name

Gene ID

Log2DR/CK

Log2SA/CK

Stresses

WRKY 6

WRKY DNA-binding protein 6

Ciclev10014642m.g

1.5

2.3

Dehydration/Salt

WRKY 11

WRKY DNA-binding protein 11

Ciclev10008836m.g

2

0

Dehydration

WRKY 22

WRKY DNA-binding protein 22

Ciclev10020943m.g

2.5

0

Dehydration

WRKY 23

WRKY DNA-binding protein 23

Ciclev10021174m.g

1.2

0

Dehydration

WRKY 28

WRKY DNA-binding protein 28

Ciclev10018230m.g

0

3.2

Salt

WRKY 33-1

WRKY DNA-binding protein 33

Ciclev10011386m.g

4.7

3.1

Dehydration/Salt

WRKY 33-2

WRKY DNA-binding protein 33

Ciclev10000654m.g

3.0

3.3

Dehydration/Salt

WRKY 35

WRKY DNA-binding protein 35

Ciclev10021624m.g

−1.1

0

Dehydration

WRKY 40-1

WRKY DNA-binding protein 40

Ciclev10008930m.g

5.1

2.5

Dehydration/Salt

WRKY 40-2

WRKY DNA-binding protein 40

Ciclev10009250m.g

0

3.0

Salt

WRKY 40-3

WRKY DNA-binding protein 40

Ciclev10026105m.g

3.3

4.5

Dehydration/Salt

WRKY 41-1

WRKY DNA-binding protein 41

Ciclev10005165m.g

2.4

4.5

Dehydration/Salt

WRKY 41-2

WRKY DNA-binding protein 41

Ciclev10021038m.g

5.3

3.2

Dehydration/Salt

WRKY 43

WRKY DNA-binding protein 43

Ciclev10024257m.g

0

−3.3

Salt

WRKY 46

WRKY DNA-binding protein 46

Ciclev10020744m.g

4.4

0

Dehydration

WRKY 48

WRKY DNA-binding protein 48

Ciclev10005203m.g

2

0

Dehydration

WRKY 50

WRKY DNA-binding protein 50

Ciclev10009761m.g

4.4

2.5

Dehydration/Salt

WRKY 51

WRKY DNA-binding protein 51

Ciclev10026733m.g

3

0

Dehydration

WRKY 70-1

WRKY DNA-binding protein 70

Ciclev10032192m.g

2.5

0

Dehydration

WRKY 70-2

WRKY DNA-binding protein 70

Ciclev10012055m.g

1.1

0

Dehydration

WRKY 74

WRKY DNA-binding protein 74

Ciclev10028715m.g

−1.2

0

Dehydration

WRKY 75

WRKY DNA-binding protein 75

Ciclev10032816m.g

0

2.5

Salt

NAC2-1

NAC domain containing protein 2

Ciclev10001956m.g

3.8

3.8

Dehydration/Salt

NAC2-2

NAC domain containing protein 2

Ciclev10001976m.g

0

1.6

Salt

NAC2-3

NAC domain containing protein 2

Ciclev10019533m.g

2.4

0

Dehydration

NAC9

NAC domain containing protein9

Ciclev10019845m.g

2.2

0

Dehydration

NAC29

NAC domain containing protein 29

Ciclev10032304m.g

3.4

2.7

Dehydration/Salt

NAC31

NAC domain containing protein 31

Ciclev10001403m.g

4.3

0

Dehydration

NAC33

NAC domain containing protein 33

Ciclev10006623m.g

0

−4.1

Salt

NAC036

NAC domain containing protein 36

Ciclev10029007m.g

5.4

2.4

Dehydration/Salt

NAC045

NAC domain containing protein 45

Ciclev10001433m.g

0

−3.3

Salt

NAC047

NAC domain containing protein 47

Ciclev10020717m.g

0

1.4

Salt

NAC058

NAC domain containing protein 58

Ciclev10023578m.g

0

−2.9

Salt

NAC062

NAC domain containing protein 62

Ciclev10019368m.g

3.4

0

Dehydration

NAC071

NAC domain containing protein 71

Ciclev10031966m.g

0

−1.4

Salt

NAC72

NAC domain containing protein 72

Ciclev10008812m.g

4.1

5.3

Dehydration/Salt

NAC84

NAC domain containing protein 84

Ciclev10016434m.g

1.2

0

Dehydration

NAC90

NAC domain containing protein90

Ciclev10029032m.g

3.5

0

Dehydration

CBF4

C-repeat-binding factor 4 (DREB1D)

Ciclev10013766m.g

inf

inf

Dehydration/Salt

CBF2

C-repeat/DRE binding factor 2 (DREB1C)

Ciclev10021923m.g

8.4

0

Dehydration

ERF1-1

ethylene response factor 1

Ciclev10005820m.g

0

3.9

Salt

ERF1-2

ethylene response factor 1

Ciclev10021652m.g

3.2

3.3

Dehydration/Salt

ERF1-3

ethylene response factor 1

Ciclev10021622m.g

0

2.7

Salt

ERF1-4

ethylene response factor 1

Ciclev10016995m.g

0

2.3

Salt

ERF4

ethylene response factor 4

Ciclev10009484m.g

2.9

0

Dehydration

ERF6

ethylene response factor 6

Ciclev10021285m.g

4.0

2.1

Dehydration/Salt

ERF9

ethylene response factor 9

Ciclev10016276m.g

0

1.4

Salt

ERF13-1

ethylene response factor 13

Ciclev10022986m.g

2.8

1.8

Dehydration/Salt

ERF13-2

ethylene response factor 13

Ciclev10024298m.g

3.9

0

Dehydration

ERF48

ethylene response factor 48

Ciclev10032029m.g

2.5

4.3

Dehydration/Salt

HD-ZIP

Homeobox-leucine zipper protein

Ciclev10010326m.g

0

inf

Salt

bZIP5

basic -leucine zipper motif 5

Ciclev10002805m.g

0

1.4

Salt

bZIP17

basic -leucine zipper motif 17

Ciclev10011169m.g

1.4

0

Dehydration

bZIP53

Basic-leucine zipper motif 53

Ciclev10007045m.g

0

1.7

Salt

bZIP58

Basic-leucine zipper motif 58

Ciclev10032777m.g

−1.3

0

Dehydration

bZIP60

basic -leucine zipper motif 60

Ciclev10002005m.g

1.1

0

Dehydration

bZIP61

basic -leucine zipper motif 61

Ciclev10008720m.g

0

−5.3

Salt

bZIPx

Basic-leucine zipper protein

Ciclev10002029m.g

2.4

1.0

Dehydration/Salt

MYB2

myb domain protein 2

Ciclev10021479m.g

inf

inf

Dehydration/Salt

MYB3

myb domain protein 3

Ciclev10009286m.g

0

3.0

Salt

MYB4

myb domain protein 4

Ciclev10028908m.g

−2.1

0

Dehydration

MYB14

myb domain protein 14

Ciclev10021699m.g

0

2.1

Salt

MYB14

myb domain protein 14

Ciclev10017679m.g

1.6

0

Dehydration

MYB15-1

myb domain protein 15

Ciclev10005629m.g

4.0

3.1

Dehydration/Salt

MYB15-2

myb domain protein 15

Ciclev10022057m.g

1.3

0

Dehydration

MYB15-3

myb domain protein 15

Ciclev10022991m.g

1.0

0

Dehydration

MYB36

myb domain protein 36

Ciclev10028804m.g

0

−2.1

Salt

MYB48

myb domain protein 48

Ciclev10029019m.g

−1.1

0

Dehydration

MYB62

myb domain protein 62

Ciclev10015986m.g

0

2.4

Salt

MYB63

myb domain protein 63

Ciclev10005102m.g

−2.1

0

Dehydration

MYB73

myb domain protein 73

Ciclev10029124m.g

1.9

0

Dehydration

MYB77

myb domain protein 77

Ciclev10002239m.g

2.9

0

Dehydration

MYB78

myb domain protein 78

Ciclev10026578m.g

−1.0

0

Dehydration

MYB82

myb domain protein 82

Ciclev10009700m.g

0

−3.1

Salt

MYB85

myb domain protein 85

Ciclev10005666m.g

0

−2.8

Salt

MYB108

myb domain protein 108

Ciclev10005387m.g

0

1.8

Salt

MYB116

myb domain protein 116

Ciclev10021157m.g

0

1.2

Salt

MYB -r1

myb domain protein r1

Ciclev10001979m.g

2.1

0

Dehydration

ZFP1

C2H2-type zinc finger protein

Ciclev10029464m.g

5.1

3.7

Dehydration/Salt

ZFP2

salt tolerance zinc finger

Ciclev10002297m.g

3.8

2.4

Dehydration/Salt

ZFP3

zinc finger (CCCH-type) protein

Ciclev10030920m.g

3.7

0

Dehydration

ZFP4

zinc finger (C3HC4-type RING finger) protein

Ciclev10028738m.g

2.8

0

Dehydration

ZFP5

C2H2-type zinc finger protein

Ciclev10028853m.g

−2.6

0

Dehydration

ZFP6

RING/FYVE/PHD zinc finger protein

Ciclev10021987m.g

2.6

0

Dehydration

ZFP7

RING/FYVE/PHD zinc finger protein

Ciclev10032323m.g

2.4

0

Dehydration

ZFP8

salt tolerance zinc finger

Ciclev10029065m.g

2.2

1.6

Dehydration/Salt

ZFP9

A20/AN1-like zinc finger protein

Ciclev10029439m.g

2.1

0

Dehydration

ZFP10

zinc finger (C5HC2 type) protein

Ciclev10000262m.g

1.8

0

Dehydration

ZFP11

zinc finger protein 4

Ciclev10029351m.g

−1.5

−1.6

Dehydration/Salt

ZFP12

GATA-type zinc finger transcription factor

Ciclev10032018m.g

1.4

0

Dehydration

ZFP13

B-box type zinc finger protein

Ciclev10016798m.g

−1.4

0

Dehydration

ZFP14

BED zinc finger

Ciclev10011114m.g

1.2

0

Dehydration

ZFP15

DOF zinc finger protein 1

Ciclev10026336m.g

1.2

0

Dehydration

ZFP16

zinc finger (CCCH-type) protein

Ciclev10027883m.g

1.1

0

Dehydration

ZFP17

CCCH-type zinc finger protein

Ciclev10014902m.g

1.0

−3.5

Dehydration/Salt

AFP18

Ran BP2/NZF zinc finger-like protein

Ciclev10026703m.g

0

−5.8

Salt

AFP19

C2H2 and C2HC zinc fingers protein

Ciclev10032889m.g

0

3.6

Salt

ZFP20

B-box type zinc finger protein with CCT domain

Ciclev10020440m.g

0

−3.3

Salt

ZFP21

GATA type zinc finger transcription factor

Ciclev10002540m.g

0

−3.1

Salt

ZFP22

C2H2-like zinc finger protein

Ciclev10001255m.g

0

−2.8

Salt

ZFP23

DHHC-type zinc finger protein

Ciclev10019818m.g

0

−2.8

Salt

ZFP24

Zim17-type zinc finger protein

Ciclev10002475m.g

0

−2.5

Salt

ZFP25

zinc finger (C2H2 type) protein

Ciclev10028631m.g

0

−2.3

Salt

ZFP26

mini zinc finger 2

Ciclev10012891m.g

0

−2.1

Salt

ZFP27

salt tolerance zinc finger

Ciclev10029065m.g

0

1.6

Salt

CAMTA1

calmodulin-binding protein

Ciclev10014524m.g

0

3.5

Salt

CAMTA2

Calmodulin binding protein-like

Ciclev10019990m.g

4.4

2.4

Dehydration/Salt

CAMTA3

calmodulin-binding protein

Ciclev10008000m.g

3.0

2.2

Dehydration/Salt

CAMTA4

calmodulin-binding protein

Ciclev10027246m.g

0

−2.2

Salt

CAMTA5

calmodulin-binding protein

Ciclev10000733m.g

4.5

0

Dehydration

CAMTA6

Calmodulin binding protein-like

Ciclev10008603m.g

2.8

0

Dehydration

  1. CK: the control, DR: dehydration, SA: salt.