Table 3 Statistics calculated from the posterior distribution of the parameters included in the most probable model for the 22 almond accessions.

From: Genome-wide DNA-(de)methylation is associated with Noninfectious Bud-failure exhibition in Almond (Prunus dulcis [Mill.] D.A.Webb)

Parameter

Posterior Probability

Posterior Mean

Posterior Variance

Lower Limit

Upper Limit

Ranking VarImp

Intercept

1.000

2.721365

1.101e-04

2.700337

2.741896

NA

Factor(deMet01)1

1.000

0.035703

1.170e-04

0.014644

0.058054

14

ChronoAge

1.000

−0.731076

4.816e-05

−0.745108

−0.717645

1

Factor(GenotypeN)2

1.000

0.741199

9.978e-04

0.683076

0.803948

4

Factor(GenotypeN)3

1.000

−0.884685

2.887e-04

−0.920034

−0.854581

7

Factor(GenotypeN)4

1.000

−0.572292

2.954e-04

−0.607085

−0.540216

8

Factor(GenotypeN)5

1.000

−0.421255

3.136e-04

−0459597

−0.389653

24

Factor(GenotypeN)6

1.000

0.858615

1.145e-03

0.795386

0.928581

25

Factor(GenotypeN)7

1.000

0.859652

1.183e-03

0.793455

0.926133

6

Factor(deMet01)1:ChronoAge

1.000

−0.010859

5.082e-05

−0–025151

0.002451

19

Factor(deMet01)1:factor(GenotypeN)2

1.000

0.377405

9.582e-04

0.318386

0.438253

12

Factor(deMet01)1:factor(GenotypeN)3

1.000

−0.100029

3.040e-04

−0.134473

−0.066831

16

Factor(deMet01)1:factor(GenotypeN)4

1.000

−0.036256

2.897e-04

−0.067587

−0.001094

13

Factor(deMet01)1:factor(GenotypeN)5

1.000

−0.091411

3.133e-04

−0.126620

−0.058245

22

Factor(deMet01)1:factor(GenotypeN)6

1.000

−0.034131

1.221e-03

−0.097879

0.037375

23

Factor(deMet01)1:factor(GenotypeN)7

1.000

−0.033510

1.188e-03

−0.099132

0.034752

15

ChronoAge:factor(GenotypeN)2

1.000

−0.037135

1.592e-04

0.010168

0.059298

2

ChronoAge:factor(GenotypeN)3

1.000

0.671377

1.592e-05

0.656178

0.686165

5

ChronoAge:factor(GenotypeN)4

1.000

0.552007

5.619e-05

0.538380

0.567475

3

ChronoAge:factor(GenotypeN)5

1.000

0.625152

5.064e-05

0.612284

0.639953

9

ChronoAge:factor(GenotypeN)6

1.000

−1.057749

7.848e-04

−1.110633

−1.002450

10

ChronoAge:factor(GenotypeN)7

1.000

−1.058923

7.621e-04

−1.112500

−1.005495

11

Factor(demet01)1:ChronoAge:factor(GenotypeN)2

1.000

−0.100419

1.526e-04

−0.122971

−0.075562

18

Factor(demet01)1:ChronoAge:factor(GenotypeN)3

1.000

0.018288

6.113e-05

0.002320

0.032875

20

Factor(demet01)1:ChronoAge:factor(GenotypeN)4

1.000

0.010936

5.863e-05

−0.003976

0.025603

17

Factor(demet01)1:ChronoAge:factor(GenotypeN)5

1.000

0.016861

5.261e-05

0.003079

0.031003

27

Factor(demet01)1:ChronoAge:factor(GenotypeN)6

1.000

0.009808

8.472e-04

−0.045120

0.068286

26

Factor(demet01)1:ChronoAge:factor(GenotypeN)7

1.000

0.009048

7.905e-04

−0.051850

0.059506

27

  1. The values for the lower and upper limits correspond to the 95% highest posterior density intervals, respectively. Ranking VarImp refers to the ranking of variance contribution to the model: lower values being top contributors and higher values being least contributors.
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