Table 1 Data collection statistics and refinement statistics.

From: Structure and dynamics of Type III periplasmic proteins VcFhuD and VcHutB reveal molecular basis of their distinctive ligand binding properties

 

Apo-VcFhuD

Desferoxamine mesylate bound VcFhuD

Apo-VcHutB

Data collection statistics

Beamline

PXBL21

PXBL21

PXBL21

Wavelength (Å)

0.980

0.980

0.980

Detector

MarCCD-225

MarCCD-225

MarCCD-225

Oscillation (°)

1

1

1

Space group

P212121

P3221

P43212

Unit-cell parameters (Å)

a = 57.25, b = 71.75, c = 125.89

a = b = 191.15, c = 129.16

a = b = 62.88, c = 135.8

Resolution (Å)

47.32–2.50 (2.60–2.50)

47.79–3.40 (3.55–3.40)

37.2–2.4 (2.49–2.40)

No. of molecules per asymmetric unit

2

4

1

Rpim (%)

9.2 (41.6)

7.1 (34.1)

2.1 (24.6)

Average I/σ(I)

9.1(2.2)

10.0 (2.1)

29.9 (3.3)

Completeness (%)

100 (100)

100 (100)

99.2 (97.5)

Multiplicity

7.3 (7.4)

11.2 (11.4)

9.7 (9.5)

Refinement statistics

Resolution (Ǻ)

2.5–47.316

3.4–43.055

2.39–28.53

Number of reflections

18616

37750

11157

Rwork/Rfree (%)

18.9/23.7

19.2/22.8

19.7/25.5

No. of atoms

 All

4324

8439

1968

 Proteins

4152

8299

1915

 Ligand

2

140

5

 Water

170

0

48

B-factor (Å2)

Average

 Protein

33.2

77.4

62.7

 Ligand

38.1

94.0

71.1

 Water

32.2

0

59.5

 RMSDs Bond lengths/bond angles (Å/°)

0.003/0.729

0.003/0.861

0.009/1.298

Ramachandran statistics (%)

 Most favoured

96.41

92.88

94.92

 Additionally allowed

3.40

5.41

4.30

 Disallowed

0.19

1.71

0.78

  1. Values in parentheses are for the outer-shell.