Figure 5: Model of TubZ filament dynamics. | Scientific Reports

Figure 5: Model of TubZ filament dynamics.

From: TubZ filament assembly dynamics requires the flexible C-terminal tail

Figure 5

For simplicity, we show only two consecutive molecules in the filament: (1) GTP-bound state induces the assembly, whereas the C-tail (green and dashed line when behind a protein subunit) establishes specific contacts with upper subunits leading to the generation of a twist and allowing the formation of the canonical longitudinal interface; (2) the catalytic residue (red) is correctly positioned and reaches GTP (yellow), which is hydrolyzed into GDP (blue); (3) the enzymatic reaction induces changes in the bottom molecule, changing the C-tail interacting surface with the upper subunits and opening the twist between both molecules; (4) the GDP-bound state results in weakening of the longitudinal interface, likely due to loss of contacts. C-tail truncated proteins do not establish the specific contacts with upper subunits within the filament, blocking the formation of the canonical longitudinal interface. Accordingly, GTP assembly leads to state 3 filaments, while GDP-bound polymers are in state 4.

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