Table 2 Enriched gene networks recruited by 90/5 action potential patterned stimulation for 5 hr.

From: Gene networks activated by specific patterns of action potentials in dorsal root ganglia neurons

Network

Score

Top Disease and Function

Focus Molecules

1

39

Cell Morphology, Connective Tissue Development and Function, Tissue Morphology

ABCC5, ABCF1, ATM/ATR, CDKAL1, CTU1, DDX52, DPH2, FAM120B, GPANK1, GULP1, HLCS, KIAA1161, MMS19, MON2, MSL2, MXD3, MYO18A, NCAPD3, NCAPH2, NKAP, ORAOV1, PHLPP1, PRIM2, RBM39, SLC12A2, SLC30A1, SLC38A2, SLC4A7, SLC7A1, SMC2, SMC3, SNX27, SRC

2

38

Neurological Disease, Small Molecule Biochemistry, Developmental Disorder

ACAD10, APP, ATCAY, CHCHD6, DPY19L3, FRMD8, GSPT2, HBS1L, IMP4, ISOC2, KCTD18, LETM2, LHFPL2, MAB21L2, NARF, ORMDL1, PATL1, PHACTR4, PLEKHO2, PUS7L, RAB39A, RCBTB1, RNF24, RP9, Rbfox3, SLC25A38, SLC41A3, TBC1D25, TCP11L2, UGGT2, ULK4, VAT1L, ZC2HC1A, ZNF322, ZNF35

3

37

Post-Translational Modification, Cell Morphology, Cellular Assembly and Organization

AFAP1, ATE1, Ank2, CEP170, DUB, FTO, HERC2, KCNC4, KIF3A, KIF3B, KIF3C, MED20, NPR2, PAN2, PCYT1A, Par6, Pkc(s), RNF168, SLC18A3, SLC6A9, TRIM46, USP1, USP10, USP12, USP28, USP29, USP30, USP32, USP38, USP40, USP42, USP54, WDR20, WDR62, ZRANB1

4

37

Cancer, Gastrointestinal Disease, Organismal Injury and Abnormalities

ABR, ADIPOR2, AGL, APPL1, CENPC, DARS2, DPYSL5, EIF5B, ERBB2IP, GAPVD1, INSM1, KCNA5, KCNS3, KCTD5, KIF26B, MINK1, MPP3, NELL1, NHLRC1, NIT1, NSL1, OCRL, PKNOX1, PRKAB2, RAB11FIP5, RPAP1, Rab11, Rab5, Rac, SLTM, TPCN2, TROVE2, ZBTB3, ZFYVE9, ZNF202

5

37

Cell-To-Cell Signalling and Interaction, Cellular Movement, Cellular Development

Alpha catenin, BAG2, BSN, CCDC117, CDH2, CDH4, CDH8, CEP68, CTBP1, CTNND1, Cadherin, DEF6, ERC2, FOXJ3, HDAC11, IQSEC1, KCTD6, LTN1, MLF2, NUP85, OGT, PHF20, RBBP5, RBM22, RNF111, S1PR1, SATB1, SSPN, Spectrin, TJP1, TMEM117, TRIM26, TRMT2A, ZEB2, ZKSCAN8

  1. Network discovery by IPA of enriched disease and function. Network score are listed for 5 top-scoring networks, encompassing processes important in cellular development, morphology, and disease.