Table 2 Primer sequences used for qRT-PCR amplification.

From: Elicitation of resistance and associated defense responses in Trichoderma hamatum induced protection against pearl millet downy mildew pathogen

Sl. No.

Target gene amplified

Forward primer sequence (5’ to 3’)

Reverse primer sequence (5’ to 3’)

1.

Phenyl alanine ammonia lyase

ATGGAGTGCGAGAACGGCC

CTGCGCGATGCTGAGGCT

2.

Peroxidase

CCCCAGAAGCACATTTGTGA

CATGGCTGCGGGCGGAG

3.

β -1,3-Glucanase

ATGGCGAGGCAGGGTGTCATC

GGATTGGACTCCTGTTTA

4.

Polyphenol oxidase

AGTCGAGGTTTGGCCACCAT

CCACCTGATGCGCTCGATG

5.

PR1

TGGACGTGCCGCTGCCG

GAACTGCGCCGCCACACG

6.

PR-5

GCGTCCTCGGTCCTCCTG

CACACGCGGCCGGAGCTG

7.

Hydorxy rich glyco proteins

GCCTAAGCCGAAGCCACCAA

GCGTGTAGGTCGGAGGAGTT

8.

DAHP Synthase

GGC TCA ATT TCA GGT ACC

GTT AGA GTC GGT AAG TAA

9.

Shikimate Kinase

CTC ACC TAC CTC TCT CTC A

AAG GCT CTG CGA AAC TCT

10.

Chorismate Synthase

ATC TTC CAA TCT TCA TATA

TCC TAG GTG TGG TAA TTC

11.

Chorismate Mutase

CTT CAA TCT AAG GTT GGT AG

CTG AAT ATC ACA GGA AGC AG

12.

IC Synthase

CAG GTT GAG TTT GAT GAG CT

CTT GAT AAG CAT CGG GTT

Reference housekeeping gene

1.

Protein phosphatase 2A

TGAGAGCAGACAAATCACTCAA

AAGAGCTGTGAGAGGCAAATAA