Figure 8: Structure-based sequence alignment of AtClpC1 NTD and AtClpD NTD with ClpA/B NTD and ClpT1/T2 proteins. | Scientific Reports

Figure 8: Structure-based sequence alignment of AtClpC1 NTD and AtClpD NTD with ClpA/B NTD and ClpT1/T2 proteins.

From: Crystal structures reveal N-terminal Domain of Arabidopsis thaliana ClpD to be highly divergent from that of ClpC1

Figure 8

The sequences have been aligned using ClustalW and the residues forming helices are underlined and helices labelled α1 to α8 (ClpA/B/C/T numbering). The residues conserved among all seven sequences are highlighted in red, those conserved among five or six sequences are highlighted in green and those conserved among four sequences are highlighted in grey. The loop region of AtClpD corresponding to α3 of other structures is given in blue. Ec and Pf correspond to Escherichia coli and Plasmodium falciparum, respectively.

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