Figure 2: Bootscan analysis of Geelong’s outbreak parechovirus with selected parechovirus sequences. | Scientific Reports

Figure 2: Bootscan analysis of Geelong’s outbreak parechovirus with selected parechovirus sequences.

From: An outbreak of severe infections among Australian infants caused by a novel recombinant strain of human parechovirus type 3

Figure 2

Bootscan analysis was used to calculate the percentage of the permutated tree to which the selected parechovirus sequences cluster to the Geelong outbreak parechovirus sequence. The key to the selected parechovirus sequences is as follows: AB759204 HPeV3 (Yamagata 2011 lineage - only coding region); GQ183018, GQ183020, KT726985 HPeV1; and DQ315670 HPeV4. Based on information from AB759206 (HPeV3Yamagata 2011 lineage52), the structural/capsid coding region is from nucleotide 701–3013 and the non-structural protein coding region from 3014–7231.

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