Table 3 Test set of effectors and effector candidates that have been experimentally shown to localize to the plant chloroplast and the predictions by several classifiers.
From: LOCALIZER: subcellular localization prediction of both plant and effector proteins in the plant cell
Effector | CTP1 | CTP2 | CTP3 | MLP124111 | PST03196 | PST18220 | ToxA |
|---|---|---|---|---|---|---|---|
Reference | Petre et al. (2015b), Petre et al. (2015a) | Petre et al. (2016) | Manning and Ciuffetti (2005) | ||||
Species | Melampsora larici-populina | M. lini | M. larici-populina | Puccinia striiformis f. sp. tritici | Pyrenophora tritici-repentis | ||
Comment | Also in mitochondria | — | — | Also in cytosolic aggregates |  | Also in nucleus | Also in cytoplasm |
Subcellular localization prediction | |||||||
LOCALIZER | Chloroplast | Chloroplast | Chloroplast | — | Chloroplast, Mitochondria, Nucleus | — | Chloroplast |
ChloroP | Chloroplast | — | — | — | — | — | — |
TargetP | Mitochondria | Mitochondria | — | Mitochondria | — | — | — |
WoLF PSORT | Chloroplast | Chloroplast | Chloroplast | Mitochondria | Cytosol | Nucleus | Cytoskeleton |
YLOC | Secreted | Secreted | Secreted | Secreted | Chloroplast | Nucleus | Cytoplasm |
Predotar | — | — | — | — | — | — | — |
BaCelLo | Secreted | Secreted | Secreted | Secreted | Nucleus | Nucleus | Nucleus |
