Table 2 Expression levels of PhANGs in ATHB17 OX, KO and WT plants under normal or NaCl treated conditions identified by RNA-seq profiling.

From: ATHB17 enhances stress tolerance by coordinating photosynthesis associated nuclear gene and ATSIG5 expression in response to abiotic stress

Gene ID

Description

Normal (TPM*)

NaCl (TPM*)

KO

WT

OX

KO

WT

OX

AT1g29930

CAB1 (chlorophyll a/b binding protein 1)

2659.41

1921.89

172.11

5531.28

4153.04

1530.00

AT1g31330

PSAF (PS I subunit F)

1117.89

912.05

284.09

1296.45

946.94

291.59

AT2g34420

LHB1B2 (light-harvesting chlorophyll protein complex II subunit B2)

2781.39

2899.35

712.06

4826.90

4362.05

1421.93

AT3g55330

PPL1 (PsbP-like protein 1)

37.48

14.53

5.57

29.30

17.14

9.41

AT3g61470

LHCA2 (PS I light harvesting complex gene 2)

2269.95

2062.94

705.34

4063.92

3235.44

1422.93

AT4g10340

LHCB5 (light harvesting complex of PS II subunit 5)

836.73

592.29

86.05

1080.78

707.61

357.03

AT4g30950

FAD6 (fatty acid desaturase 6)

182.28

154.60

67.61

260.43

212.79

127.28

AT5g66570

PSBO1 (PS II oxygen-evolving complex 1)

2749.86

2251.56

485.78

4219.77

3937.28

1953.87

AT1g52230

PSAH2 (PS I subunit H2)

69.84

92.16

26.70

72.84

60.00

30.22

AT2g34430

LHB1B1 (light-harvesting chlorophyll protein complex II subunit B1)

1449.82

1655.64

306.57

4226.69

3826.35

2079.15

AT3g16140

PSAH1 (PS I subunit H1)

143.97

158.89

57.24

196.95

166.81

48.03

AT1g15820

LHCB6 (light harvesting complex of PS II subunit 6)

1560.05

1324.97

614.10

1194.31

1474.56

735.88

AT1g29910

CAB3 (chlorophyll a/b binding protein 3)

821.65

702.62

110.45

1632.16

1800.76

510.13

AT2g39470

PPL2 (PsbP-like protein 2)

46.05

21.47

15.17

63.48

79.12

26.82

AT3g47470

LHCA4 (light-harvesting chlorophyll protein complex I subunit A4)

1025.23

863.49

428.16

1665.12

2171.46

1119.13

AT3g50820

PSBO2 (PS II subunit O-2)

146.05

87.21

46.29

316.18

454.27

462.50

AT3g54110

PUMP1 (plant uncoupling mitochondrial protein 1)

87.13

71.68

40.53

43.95

49.28

64.84

AT4g02770

PSAD1 (PS I subunit D-1)

2057.38

1748.79

900.69

1283.02

1341.55

856.36

AT5g54270

LHCB3 (light-harvesting chlorophyll B-binding protein 3)

294.44

231.23

70.69

320.65

348.94

127.28

AT1g61520

LHCA3 (PS I light harvesting complex gene 3)

2178.95

1902.07

1325.00

3721.29

2438.82

1668.09

AT1g45474

LHCA5 (PS I light harvesting complex gene 5)

55.87

67.72

31.50

46.39

35.77

20.21

AT1g55670

PSAG (PS I subunit G)

37.48

37.33

23.63

38.66

24.56

13.81

AT1g67740

PSBY (PS II BY)

89.90

63.75

142.91

135.10

154.12

64.44

AT1g76570

LHCB7 (light-harvesting complex B7)

8.44

7.93

9.03

24.82

11.21

10.81

AT3g54890

LHCA1 (PS I light harvesting complex gene 1)

53.38

122.55

222.82

103.76

94.78

50.03

AT4g28660

PSB28 (PS II reaction centre PSB28 protein)

33.33

10.90

20.75

13.43

10.71

4.00

  1. *TPM: transcripts per million tags.